Lacticaseibacillus pabuli: PQ472_06110
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Entry
PQ472_06110 CDS
T09936
Symbol
addA
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
lpab
Lacticaseibacillus pabuli
Brite
KEGG Orthology (KO) [BR:
lpab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpab03400
]
PQ472_06110 (addA)
Enzymes [BR:
lpab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PQ472_06110 (addA)
DNA repair and recombination proteins [BR:
lpab03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
PQ472_06110 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
AAA_12
ResIII
AAA_16
Herpes_ori_bp
Motif
Other DBs
NCBI-ProteinID:
WDF81512
LinkDB
All DBs
Position
1292612..1296397
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AA seq
1261 aa
AA seq
DB search
MPNYTDSQKRAIKDGAPKHKDGQTQLGHNVLVSASAGSGKTSVLVQRVLSQILDDGDISH
LLVVTFTKAAAAEMKSRIQDALKDQLTPEKATKLTAHQQRHLASQIGLVNSAAISTLDAF
ALQIVQQYYYILDLDPGFRVLADQTESTLIQEDVWDKLREKYYANDTDGSFTALTDNFAN
GWHDDKLGDIVTKIYTYAQTTPNPEAWIDQFTNVYDGDLSANGALTKQLRAAMQDPVADM
VKNYTTASQMLVEEQTEMAADGNESAAATLITNELAKAKALQDALSGNYTQMHDAAMTMN
YEGQHWITWPSLRQKKYKNVPELMDAHALAKNLRDDAHSNIFDKQVMPLLKLANDDLLKA
TQGAKKLTDKLSEVAKAFLDAYWAEKRRRHALDFSDIEHLALDILTAPSQEDKPNVAAIY
QDSFDEILVDEYQDINELQETLLNALTAKPVGNRFMVGDVKQSIYGFRLAQPRLFMNKYN
TFAPATASAAEFTAKGEHISLAENFRSTSDVLDFTNLIFRQIMDSQLGSVNYTGAEPLVL
GAKDYPDDFHPETELLIYTPKDAEDESEAAQMDKDLGQVNIVIQRIHELMRSDTKLYNRK
THEMRPLQYKDITLLVPTRGQNLIIQEQFNRAGIPIMVTDAQNYFKTTELQVMLSMLRVI
DNPRQDIPLAAVLRSPIVGLNADQLALIRLSQKHADYYDALTTFIANYDANTASNMAKPT
YERVQRFMTQLTQFRNIARENQLVDLIWAIYEETGYLDFVGGMPGGKQRQANLHALYERA
HSYEAGGFKGLFAFVHFIELMQDRDKDLATPVSVDPDTDAVRIMTIHGSKGLQFPVVFLM
NASRTLDAAHDSNGTILSDTGVGMSWIDPDTNMKVELPQLQLAKQNQKASERAEDLRVLY
VALTRAEQKLFVVGNTKTDQATTLDRWAKMSNGDTLRLPISARLTANSELDLIGASLIRH
PLFPDRPAGVTSPAELAKDPTKFKVTFITQPVVPGEGKTPAGEQIKQPVLDVNLKDYFNF
KYPYTAATETTGFKSVSEIKQLFADPDITELNQQNNGTLLGGKFSAPLADPQFVSGTSAQ
QASATAIGTATHTILQRLNLHQPVTEAAIDAVRDDLVTSGVLSEEVAGKVKTNHILNFFA
TELGKNMLAHPDAVHREEPFALLLPGNAIFEALEGDDQDILVHGIMDAYIQTPEQLILLD
YKTDHIGKGGEEAIMSRYSGQLRLYARALAAATGRPVDASYLVLLESGHVLALSPETRYD
K
NT seq
3786 nt
NT seq
+upstream
nt +downstream
nt
atgcctaattatactgacagccagaaacgcgccattaaggacggggcacccaaacataag
gacggtcagacccaactgggccacaacgtactcgtctcagcaagtgccggctcggggaaa
acgtccgtgctcgttcagcgtgtgcttagccagattctagatgacggtgacatttcccat
ctgctcgtggtgaccttcaccaaggccgccgctgctgaaatgaagtcccgtattcaggat
gcgctcaaggaccagttgacgcccgaaaaggccaccaagctaacggcccatcaacaacgc
caccttgctagccagattggtctggttaactccgcggccatcagtacccttgatgccttt
gccctgcaaatcgtgcagcaatattactacatcctggacctggaccccggcttccgtgtg
ctggccgaccagaccgaaagcacgctcatccaggaagatgtttgggataagctacgtgaa
aaatactacgctaatgacactgacggcagtttcaccgcgctcaccgataactttgcgaac
ggctggcacgatgacaaactcggcgacatcgtcacgaaaatctatacttatgcgcagacc
acgccaaatcctgaagcctggattgaccagttcaccaatgtctacgatggcgatttgagc
gcgaacggcgccttgaccaagcagctccgcgccgcgatgcaagatcccgtcgcggacatg
gtcaagaactacacgaccgccagtcagatgttggtcgaagaacaaactgaaatggccgcg
gatggaaatgagtctgcggcagcgaccctcatcaccaacgaattagccaaggccaaagca
ctgcaagacgcactgtctggtaattatacgcaaatgcacgatgcggccatgacaatgaac
tatgagggtcagcattggattacctggccatctttgcgccaaaaaaaatacaagaacgtt
cctgaattgatggatgcacacgcgcttgccaagaatctacgtgatgacgctcacagcaac
atcttcgacaagcaggtcatgccgctgctcaagctagcaaacgacgacctgctcaaggca
acgcaaggcgccaaaaagttgaccgataaattaagcgaggtcgccaaagcattcctggac
gcctattgggcagaaaagcgccgccgccacgcgttggatttctccgacattgaacatctg
gccctggatatcctgacggcgccgagccaggaggataaacccaacgttgccgccatttac
caagacagttttgatgaaatcctagttgacgaataccaggatatcaacgagctgcaggaa
accttgcttaatgccctgaccgccaaacccgtcggcaaccgcttcatggtgggggatgta
aagcagagcatttacggcttccggctggcccaaccccgcttgttcatgaataagtacaac
acctttgcgcccgcaaccgcgtccgcggcagagttcacagcgaagggtgaacacattagc
cttgccgaaaacttccggtccacgtctgacgtcctcgactttaccaacctcatcttcaga
cagattatggatagccagctggggtccgtgaattacaccggcgctgaaccgctagtactg
ggcgctaaggactatccagatgatttccatcctgaaaccgaattgctcatctatacgcca
aaggatgccgaggatgagtcagaggctgcacagatggacaaggacctcgggcaagtgaac
atcgtcattcagcgtatccatgaactcatgcgcagtgataccaagttgtataatcggaag
acccacgagatgcggccgttgcagtacaaggacattacgctactcgtgccaacgcgtggt
caaaacctcattatccaggaacagtttaaccgcgctggaatccccattatggtcaccgac
gcgcaaaactactttaagacgaccgaattgcaggtcatgctgtccatgctgcgggtcatc
gacaatccgcgtcaagacattccgctggcggccgtactgcgctcgccaatcgtgggcctg
aacgccgaccaactggcgctcattcgtctgagccagaagcacgccgattactacgacgcg
ctgacgaccttcattgccaactacgacgctaacacagcctccaatatggcaaaaccaacc
tatgaacgcgtccagcgcttcatgacgcaactgacgcagttccgcaacattgcccgtgaa
aaccagcttgtcgacctcatctgggccatttacgaagagacgggttaccttgactttgtt
ggcgggatgccgggcggtaagcagcgccaagccaatttgcacgccttgtacgaacgcgcc
cacagttatgaagcaggcggctttaaaggcctgttcgcctttgtccactttatcgaactc
atgcaggaccgcgataaggatctggccacacccgtatccgtagaccctgacaccgacgcc
gtccgtatcatgaccattcacggtagtaaggggctccagttcccggtcgtcttcttaatg
aatgctagccgcacactggacgccgcgcacgacagcaacggcaccatcctgtccgatact
ggggtggggatgtcctggattgaccccgatacaaatatgaaagttgagttaccccagctg
caactcgccaagcaaaatcaaaaagcaagcgagcgcgcggaagatctgcgtgtgctatat
gttgcgttgacgcgcgctgagcagaagctttttgtcgtcggtaacactaaaactgatcag
gcgacgacccttgatcggtgggccaagatgtccaacggcgatacactccggctgccaatc
agtgcgcggctcactgccaacagtgaactggacctcattggtgctagtttgattcggcac
ccgctatttccagaccgaccagcaggtgtcacttcgcctgctgaattagcaaaggatccg
accaaattcaaggtcacgtttatcacccaacctgtcgtgccaggtgagggcaagacccca
gcaggtgaacaaatcaaacaaccggtcctggacgttaatctgaaggactactttaacttt
aaatacccatacaccgccgcaactgaaacaactggctttaagtccgtttccgaaatcaaa
caactctttgcggacccagacattactgaattgaaccaacaaaacaacggaaccctgctt
ggtggtaagttcagcgcgccactcgctgatccgcagtttgtcagtggtaccagtgcccaa
caggcgagtgccaccgccatcgggaccgccacccataccatcttgcagcgcctcaacctg
catcaaccggtgactgaagcagccattgatgccgtccgcgacgacctagtgaccagtggt
gtgctgagcgaagaggtcgctggcaaggtcaaaacaaatcatattcttaacttctttgcg
accgagctgggcaagaacatgttggcacacccggatgctgtgcatcgcgaagagcctttt
gccttactgctgcccggtaacgccatcttcgaggcgctcgaaggcgacgatcaggacatc
ctggtccacgggattatggacgcctacatccagacgcctgagcaactgattttgctggac
tacaagactgatcatatcggtaagggcggcgaggaggccatcatgtcgcgttatagcggc
caattacgcttgtacgctcgtgccttagccgcggcaactggtcgtccagtcgacgccagc
tacctggttctcctcgagagcgggcacgtgctagcgctgagcccagagacaaggtatgat
aaataa
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