Lacticaseibacillus pabuli: PQ472_06570
Help
Entry
PQ472_06570 CDS
T09936
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lpab
Lacticaseibacillus pabuli
Pathway
lpab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lpab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PQ472_06570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpab03019
]
PQ472_06570
03400 DNA repair and recombination proteins [BR:
lpab03400
]
PQ472_06570
Enzymes [BR:
lpab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PQ472_06570
Messenger RNA biogenesis [BR:
lpab03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PQ472_06570
DNA repair and recombination proteins [BR:
lpab03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PQ472_06570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
WDF81595
UniProt:
A0ABY7WUJ9
LinkDB
All DBs
Position
complement(1393561..1394976)
Genome browser
AA seq
471 aa
AA seq
DB search
MNTQLNEALHQLGYKAFRTGQSEIITASLAGQDVLGIMPTGSGKTLCYQLPGMIRGGLTI
VIEPLLALMRDQQLRLQAAGEKRVLMLSSQLTGAEWQQALVSLDHYRFLFVAPEMVQRDD
VRRAISQTRVSCLVVDEAHCIYQWGPDFRPAYLRLNELRPYTQNAPVMALTATAPQKVRD
SIVASLGMTHDPFIYAGNVDRPNLFIGRTKVADTGEQLQVLDSRLQAIHGSAIVYCPTKR
QCEELAERYRNTAGRHVAYYHAGLDAHTRTLRERQFQLGSVDTLFATSAFGMGVDKPDVR
LVVYLGVPATLEEYMQAIGRAGRDGQPAVTEMLCTRTDMQLTTNRLLDLPTPAMVNTIYK
KPELYQRSDDPQIQLVVAYHQSGFSQGEVNNALNERVGAKQATFQAVIDFLNESQCLRKN
LMTYFASDCKPHDARCCGTLDATFIASLPAVAHRAATPAQDWRAVFKHIFK
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgaacacgcaactgaatgaggccttacaccaattaggttacaaggcgtttcgaaccgga
caatccgaaatcatcaccgccagtttagcgggtcaggacgtgcttggtattatgcccacg
gggagtggtaaaaccctctgttaccagctgccggggatgattcgtggtggcctgactatt
gtcattgaaccgctgcttgccctcatgcgcgaccagcagctgcggttgcaagccgctggt
gagaagcgggtgctgatgttaagctcacagctgacgggggcagaatggcagcaggctttg
gtcagcctcgatcattatcgttttctctttgtcgcgcctgaaatggttcagcgcgatgat
gtgcgccgcgccattagtcagacgcgtgtgagttgcctcgtggtggatgaagcacattgt
atttaccagtggggacccgactttcggcccgcttatttgcgcttgaacgaattgcgtccc
tacacgcagaacgcacccgtgatggcactcacggcaacggcaccgcaaaaggtccgcgac
agtatcgtggcgagtttggggatgacgcacgatccgttcatctatgcgggtaatgtcgac
cggcccaacctgtttatcggccgaaccaaagtggcagacactggcgaacagctgcaggtc
ctggattctcgactgcaggcaattcacggcagtgccatcgtttactgcccaactaagcgc
cagtgtgaagagctggcggagcgttaccgcaacaccgcggggcgtcacgttgcgtattac
catgccggcctagatgcccacacgcgtaccttgcgcgagcgtcagtttcagctgggtagt
gtcgacaccttgtttgcaacgagtgcctttgggatgggtgttgataagccagatgtccgt
ctggtcgtctatctcggggtcccggcgaccctggaagaatacatgcaggcaattggtcgc
gccgggcgtgatggacagcctgccgtcacggagatgttgtgcacacgcacggacatgcaa
ctgaccacgaatcgcttgttggacttgccgacgcccgccatggtaaacacgatttacaag
aagcccgagttgtaccaacgcagtgatgatccgcaaattcaactggtcgtggcctaccac
caatctgggtttagccagggcgaagtgaataacgccctgaacgaacgggtcggggcaaaa
caggcgacgttccaagcggtcattgattttctgaatgaaagtcaatgtctgcgcaaaaac
ctgatgacctactttgccagtgactgtaaaccgcatgatgccaggtgctgtgggacgcta
gacgcgactttcattgcgtctttgccggccgtagcccacagagctgccacccccgcgcaa
gattggcgcgccgtatttaaacatatttttaaataa
DBGET
integrated database retrieval system
