Lacticaseibacillus pabuli: PQ472_06830 Help Entry PQ472_06830       CDS       T09936                                  Name (GenBank) ribonuclease J   KO K12574   ribonuclease J [EC:3.1.-.-] Organism lpab  Lacticaseibacillus pabuli Pathway lpab03018   RNA degradation Brite KEGG Orthology (KO) [BR:lpab00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     PQ472_06830  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:lpab03019]     PQ472_06830 Messenger RNA biogenesis [BR:lpab03019]  Prokaryotic type   Bacterial mRNA degradation factors    RNA degradosome components     Ribonucreases      PQ472_06830 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNase_J_b_CASP RNase_J_C Lactamase_B Lactamase_B_2 RMMBL Anti-Pycsar_Apyc1 DUF4453 Lactamase_B_6 Motif Other DBs NCBI-ProteinID:  WDF81645 UniProt:  A0ABY7WN75 LinkDB All DBs Position 1455128..1456810 Genome browser AA seq 560 aa AA seqDB search MKLDIKKNEVAAFAVGGLGEIGKNMYAVQYQDEIIVMDAGIKFPEDDLLGIDYVISDYSY LKQHADMVKALVITHGHEDHIGGIPYFLKELPTVPVYAPPLAAALIRGKLEEHGILRETE LHEIGEDDVLKFDKITVDFFRTTHSIPDTLGIAVHTPVGVIVETGDFKFDLTPVGNQPAP NLQRMAKLGSEGVLLLMSDSTNAEIPNFTKSERFVGHSIRHIFEGIEGRIIFATFASNIS RIAQATEVAMKNGRKIAVFGRSMETAIVNGRELGYLNIPDDVLVDAHDLNHLPADKVMIL CTGSQGEPMAALSRIANGTHRQISIQPGDTVVFSSNPIPGNTTSVNAVINQLEAAGADVI HGKINNIHTSGHGGQEEEKLMLRLIKPKFFMACHGEYRMQKLHTELAQQCDVPAENCFIM ENGDVLAMTENSARRAGHFPASDVYIDGSGIGDIGNAVIRDRRMLSEEGLVVVVATINMQ KHTVLAGPDLLSRGFVYMRESGELINQAQRRVYRTIKQTFTNNEKVSEAMLKDAISDSLS DFLFDRTERKPIIIPMLITL NT seq 1683 nt NT seq  +upstreamnt  +downstreamnt atgaagctcgacattaagaaaaacgaagtcgctgcgttcgctgtcggcggactcggcgaa atcgggaagaacatgtacgccgtgcagtaccaggacgaaatcatcgtcatggatgccggc atcaagttccccgaagatgatttgcttgggattgattacgtcatttctgactactcatac ctcaagcagcacgcagacatggttaaggcccttgtaatcacccacggccacgaagaccat atcggtgggattccttactttttgaaggaactgcctaccgtgccagtttatgccccacct ttagctgctgccttgatccgtggcaagctcgaggaacacggcattctgcgcgaaactgaa ttgcatgaaatcggtgaagacgatgtgctgaagttcgacaagattaccgtcgacttcttc cgcacgacccacagtatcccagataccctggggattgcggtccacacgccagttggtgtc atcgtcgaaactggtgacttcaagtttgacctcaccccagtcggtaaccagcctgcccct aacctgcagcggatggcaaaacttggctccgagggtgtcctcttgctcatgtctgactcg acgaacgcggaaattccgaacttcaccaagtccgaacgcttcgtcggccattccatccgc catatttttgagggcatcgaagggcgcatcatctttgccacctttgcctccaacatctcc cggattgcgcaagccaccgaagttgccatgaagaacggccgcaagattgcggtcttcggc cggtccatggaaactgcgattgtgaacggccgtgagctcggttacctgaacattcctgac gacgtcctggtcgacgcgcatgacctcaaccatctgcctgcagacaaggtcatgattctg tgtaccggttcgcaaggtgaaccaatggctgccctttcgcgcattgccaacgggactcac cgtcagatcagcattcagcctggtgacaccgtggtcttctccagtaacccaattcctggt aacacgaccagcgttaatgccgtgattaaccagcttgaggctgccggcgcggatgtcatt cacggtaaaatcaacaacattcacacatctggtcatggtggccaggaagaagaaaagttg atgctacgcctgatcaagcctaagttcttcatggcttgccatggtgaataccggatgcag aagctgcacaccgaacttgctcagcaatgtgacgtgccagccgaaaattgcttcatcatg gaaaatggtgatgtccttgcgatgactgagaactcagcccgtcgcgcgggtcacttccct gccagcgatgtttacattgacggtagtggtattggtgacatcggcaacgcggttatccgt gatcgccggatgctctctgaagaaggtctggttgtcgtcgttgcgacaatcaacatgcag aagcacacggttttggcaggtcccgacttgctctcccgtggtttcgtctacatgcgtgaa tctggcgaactgattaaccaggcgcagcgccgcgtttaccggaccatcaagcagacgttc accaacaacgaaaaggtttctgaagctatgctcaaggatgccatttctgacagtctgagc gatttcttgttcgaccggacggaacgtaagccaatcatcattccaatgttgattacttta taa

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