Lacticaseibacillus parahuelsenbergensis: LACPH_000617
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Entry
LACPH_000617 CDS
T10275
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
lpah Lacticaseibacillus parahuelsenbergensis
Brite
KEGG Orthology (KO) [BR:
lpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpah03400
]
LACPH_000617
DNA repair and recombination proteins [BR:
lpah03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LACPH_000617
Archaeal homologous recombinant proteins
LACPH_000617
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_27
SbcC_Walker_B
AAA_29
nSTAND3
ABC_tran
AAA_18
AAA_21
NPHP3_N
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WLV78644
LinkDB
All DBs
Position
655335..658460
Genome browser
AA seq
1041 aa
AA seq
DB search
MKLKQLHMQFFGPYADETVDFDDFQTSPLFLISGPTGSGKTTIFDALVYALYGETSGERD
GVQMRSNFASHHDLTKVTLTFEHDGKHYSVTRQPQQLQQKKRGDGLTEVKAKVVLAIADG
DKQVAEYTKKNQVQAQLDAVLHLDAKQFRQIVLLPQGDFRHFLDADSNAKEDLLRDLFGT
QLIQRWQTAMLAKTKEQGAEIQDQERMLNLLTSQFDFEVEPDENATPADKLDLMRETVEK
QAVTVAARQKAADSSHHAYQVAQAALQAGRQLAQAFKDREQTTAALAKLAEQEPVQQDRL
KRMAQLIWVQQHEAAAQRVETTAQDLANARKQATQTKATLVAAQQSMDQAKTSLAELQQQ
EPTINAKQKQLDQLQSVREQLVNMNAQKEQVAVQANAVTKASAALKKAQQKLADDQQTLT
QKQTELSDLSVTDLASQAAEHKQLLATLTPIAANYQEAQKDAITFGEKLAKVKASLEKST
QTSKTTAQQLNDLQQTQIKQQISRLAAKLEPGAPCPVCGSLEHPHRAVATTEPLVTEAAI
KQAEQARQQAAAKETTLQTQLKNLEEQQAAANKKASVAKHDFVDTLAQQPNFMSSEADHD
DILAQLDALETETGKIVKDLTAAEAKQTTLEAALKSLQTAVTKDTDKVQAAQEALNTAKI
EAATATSALATMQAALPEGTSDLETVTAQSTELTQAVDTYQKNRQAAQDKVSDLDRQLAG
LHADERHATEQIAKLEKDHQEAAAAFLQAVTEYFGADGSKQFTALKEQLDQLPILQQQTQ
DYNNAVLKQKTLLESSNKTIGDQHEPALDQLEEQATLTEAAATKAQTALIEVQQAHDTAK
KLLKQAADILAKNKAALAAYADLQTLTTVMNGNGPKKLSLERYVLQAYLQQILDVANTRL
QVLSNQRYQFVLHTDLGTQKIHSGLEIDVYDDQVGEQRAVQTLSGGESFIAALSLALALG
EVIQQESGGINIDALFVDEGFGSLDTNSLDVAMNALESLEGESRLIGIISHVTELRDNIP
DQLQVQPAGTGRSRLKVLHMA
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgaaactaaaacaattacacatgcagttttttggcccgtatgcagatgaaacggttgac
tttgatgattttcagaccagtcccttgtttctgatcagtggtccgaccggtagcgggaaa
accaccatttttgacgcgctggtgtatgccttgtatggcgaaacttctggcgagcgggat
ggcgttcagatgcggtcgaattttgccagccatcatgatttaacgaaagtgacgttgacg
tttgaacatgatggcaaacactactcggtcacgcggcagccgcaacagttgcaacaaaaa
aagcgcggggatgggcttaccgaggttaaggccaaggtcgtgctggcgatcgcggatggc
gataagcaagtcgcggaatataccaagaagaatcaggtgcaggcgcagttagatgcggtt
ttgcatctggatgccaaacagtttcggcagattgttctgttgcctcaaggcgattttcgg
cactttttggatgcggacagtaatgctaaggaagatttgctacgagacttgtttggcacg
cagctcattcagcgctggcagacagcaatgttagccaaaaccaaagagcagggcgcggaa
attcaggatcaggaacgcatgctcaacctgctgacatctcagtttgattttgaagtcgag
ccagatgaaaatgctaccccagcggacaagttggacttgatgcgggagactgtcgaaaaa
caagcggtgacagttgcggcacgacaaaaagccgccgatagtagtcatcatgcctatcag
gttgcacaggcagcgcttcaagcgggcagacagttggcgcaagcgttcaaagatcgcgaa
cagaccaccgctgcgttggcgaaacttgccgagcaggaaccggttcagcaagaccgtctg
aaacgcatggctcaattaatctgggttcagcaacatgaagccgctgcgcaacgggtcgaa
accacagcgcaggatttggctaatgcgcggaagcaagcaacgcagaccaaagcaactttg
gtggcggcccaacagtccatggatcaggccaaaacaagcttggccgagttgcagcaacaa
gagccgactatcaacgcgaagcaaaaacaacttgatcaattgcagtcggttcgcgaacaa
cttgtcaacatgaacgcgcaaaaagaacaggtagcagtgcaagcaaatgcagtcacgaaa
gcaagtgctgcattgaagaaggcgcagcaaaaactcgcggacgatcaacaaacgcttacc
cagaagcaaaccgaattatctgacttgtcagtgaccgatttagcaagtcaagcagcagaa
cataaacagttattggcgaccttgacgccgattgcagcgaactaccaggaagcgcaaaaa
gatgccattacttttggagaaaagttagcaaaagttaaagcttcgttggaaaaatcgaca
cagaccagcaaaacgacagcgcaacaactaaatgacctgcaacaaacccaaatcaagcag
caaatttcccggctggcggctaagctggaacccggtgcgccttgtccggtttgcggtagc
cttgagcatcctcaccgagccgtggccacgaccgaaccattggtaaccgaggcggccatc
aagcaggcggaacaagcgcgtcagcaggctgctgcaaaagaaacaactctgcagacgcag
cttaaaaatcttgaagagcagcaggcagcggctaacaaaaaggctagcgtcgccaagcat
gactttgtggacacactggcccagcaaccgaatttcatgagttctgaggctgaccatgac
gatattctggctcaattggatgcgcttgagactgagactggcaagatcgtgaaggatctg
actgcagctgaagcgaaacaaacgacgcttgaagcagcattgaagtcgttgcaaaccgct
gtcacgaaggatacggacaaagttcaggctgctcaagaggcgcttaataccgccaaaatt
gaggctgctacagctacgagtgcactggcgacgatgcaagcggcgctgcctgagggaacc
agtgatttggaaaccgtgacggcacaatcgacggaactgacccaagcggttgacacgtat
cagaaaaaccgacaagccgcacaagacaaagtaagcgacttggatcgccagctagccgga
ctccatgccgatgagcgccacgccacggagcaaattgccaaactggaaaaagaccatcag
gaagcagcggcggcctttttacaagcagtaacagaatattttggcgcagatgggtccaaa
caatttactgcactaaaagagcaattggatcagttgccgattttgcaacagcagactcaa
gactataacaatgcggttttgaagcaaaagacgttattggaatccagcaataaaaccatt
ggcgatcagcacgagccggcgcttgatcaacttgaagagcaggccactttgacggaggct
gcagcaaccaaagcccagactgcgttgattgaagtgcagcaggcgcatgacacggccaaa
aagttgttgaagcaggctgcggacattttagcaaaaaataaagccgcgctggctgcctat
gctgacttacagacgttgacaacagtgatgaacggcaatgggccgaagaagctgagtttg
gaacggtatgttctgcaagcctatcttcaacaaattctggacgtcgccaacacgcggctg
caggttctatcaaatcagcgctatcagtttgtgctgcacaccgatctgggtacgcagaaa
attcattccggtttggaaatcgatgtttatgatgatcaggttggcgaacagcgcgcggtt
cagacgctgtccgggggtgaaagcttcatcgcagcccttagtctggcgctagcattaggc
gaggtgattcaacaggaaagtggcggcattaacattgatgcgttgtttgttgatgaagga
ttcggcagtttggacaccaatagccttgatgtggccatgaacgcccttgaatcattggaa
ggcgaatcgcggctgatcggcattatttcccacgtcacggaattacgcgataatattccc
gatcagctccaggtacaaccggcaggcactgggcgcagtcggttgaaagtgttgcatatg
gcttag
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integrated database retrieval system
