Lacticaseibacillus parahuelsenbergensis: LACPH_001083
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Entry
LACPH_001083 CDS
T10275
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
lpah Lacticaseibacillus parahuelsenbergensis
Pathway
lpah00260
Glycine, serine and threonine metabolism
lpah00460
Cyanoamino acid metabolism
lpah00630
Glyoxylate and dicarboxylate metabolism
lpah00670
One carbon pool by folate
lpah00680
Methane metabolism
lpah01100
Metabolic pathways
lpah01110
Biosynthesis of secondary metabolites
lpah01120
Microbial metabolism in diverse environments
lpah01200
Carbon metabolism
lpah01230
Biosynthesis of amino acids
lpah01240
Biosynthesis of cofactors
lpah04981
Folate transport and metabolism
Module
lpah_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
lpah00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LACPH_001083 (glyA)
09102 Energy metabolism
00680 Methane metabolism
LACPH_001083 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LACPH_001083 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
LACPH_001083 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
LACPH_001083 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
LACPH_001083 (glyA)
Enzymes [BR:
lpah01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
LACPH_001083 (glyA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
WLV79049
LinkDB
All DBs
Position
1151363..1152595
Genome browser
AA seq
410 aa
AA seq
DB search
MDFMAQDPEVFGAIHHEEERQEHNIELIASENIVSPAVRAAQGSVLTNKYSEGYPGHRYY
GGNQYIDVVENLAIDRAKKLFGAEFANVQPHSGSQANMAAYRAFLEDGDKVLAMDLTDGG
HLTHGSPVSFSGQEYHFYHYGLDAKTERLDYDKIRAQAEQIKPRLIVAGASAYSREIDFK
KFREIADHVGAFLMVDMAHIAGLVAGGVHMNPVPYSDVVTTTTHKTLRGPRGGMILAKAE
YGKAINSALFPGIQGGPLDHVIAAKAVALGEALKPEFKTYTQQILDNMQAMVAGFEEDPH
LRLISGGSDNHMVLIDVTGYGVNGRQVQDLLDEVDITTNKNQIPGEQNGPFKTSGIRVGT
AAITTRGFTPEESKRVAELISAAIAHRDDQPALDQIRQEVLALTARHPLS
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggatttcatggcacaagacccagaagtcttcggcgcaattcatcatgaagaagagcgt
caggagcataatatcgaactcatcgcctcggagaacattgtttcaccggcagttcgcgct
gctcaggggtcggttttgactaacaagtattccgaaggctatcctggccatcggtattat
ggcggtaatcaatacatagacgtggtcgaaaatctggctattgatcgggcgaaaaaactt
tttggggcagagtttgccaatgtgcagccgcattccgggtcacaggccaatatggcagcc
tatcgtgccttcttggaagatggcgataaagttttagcgatggacttgaccgatggcgga
catctcacccatgggagtccggtcagctttagcggtcaggaataccatttttaccattac
gggttggatgccaagaccgagcgcttggactacgacaagattcgggcgcaggcggaacag
atcaagccgcggttgattgtggccggtgcctcggcttacagtcgcgagattgatttcaag
aagttccgcgaaattgccgatcatgtcggtgcctttttaatggttgatatggcgcatatt
gccgggttggttgccggtggggtgcatatgaatccggtgccgtattcagacgtggtaacg
acgacgacgcacaagacgctgcggggaccgcgcggcgggatgattctggccaaggctgaa
tatggtaaagccattaattccgctttgttcccgggcattcaaggcggcccattggatcat
gtgattgccgccaaagccgttgcgctgggcgaagcactgaagcctgaattcaagacatac
acgcaacagattctcgataatatgcaggccatggtcgccggttttgaggaagatccacat
ttacggttgatttccggcgggtcggataatcacatggtattaattgatgtcacagggtat
ggcgtcaatggtcgacaagttcaagatttattggacgaagtggacattaccaccaacaaa
aaccagatcccgggcgagcaaaacggcccgttcaaaaccagcggtatccgcgtcggcaca
gctgccatcaccacccgcggctttacgccagaagagagtaagcgagttgccgaactcatc
agtgcggcaattgcgcatcgcgatgatcaaccggctttggatcaaattcgtcaagaagtc
cttgcgctgacagcccgtcatcccttatcatag
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