Lacticaseibacillus parahuelsenbergensis: LACPH_001265
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Entry
LACPH_001265 CDS
T10275
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lpah Lacticaseibacillus parahuelsenbergensis
Pathway
lpah03030
DNA replication
lpah03430
Mismatch repair
lpah03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lpah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LACPH_001265 (dnaE)
03430 Mismatch repair
LACPH_001265 (dnaE)
03440 Homologous recombination
LACPH_001265 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lpah03032
]
LACPH_001265 (dnaE)
03400 DNA repair and recombination proteins [BR:
lpah03400
]
LACPH_001265 (dnaE)
Enzymes [BR:
lpah01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LACPH_001265 (dnaE)
DNA replication proteins [BR:
lpah03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LACPH_001265 (dnaE)
DNA repair and recombination proteins [BR:
lpah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LACPH_001265 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
tRNA_anti-codon
HHH_3
Motif
Other DBs
NCBI-ProteinID:
WLV79219
LinkDB
All DBs
Position
1345631..1348927
Genome browser
AA seq
1098 aa
AA seq
DB search
MTFTQLQVHSNYTLLHSPLALPDLIQAAKTRGYTAIALTDTNVVYGLVEFYRQAKAAGLK
PLLGMQIDIDDARLLVIAENNTGYHQLLKLSTQIMLAKTPVKFADLLPLTGLAAIALPDS
PFAEAVTTHHDEQAMAFLTALKAKQPASVYVGVDEAHLDSAIPAFIAAHQLEPLALGNVL
YRDPTDAFTQKVMVAIDEGSQLNFRDPVLTDAGEAWLKPPTDAAAPFAAAGLQTAVDHTA
DIAARADVTIDFKQPQLPHYQTPDQIPSKDYLTKLAKSGLAARFHGQPIPEAYQKRLQYE
LHVIIEMGFADYFLVVWDVMNYAHKVNIMTGAGRGSAAGSLVSYALAITEVDPIEYNLLF
ERFLNPARAQMPDIDLDIPDNRRGELIQYVHDKYGENHMAQIITFGTFGAKQAIRDVARV
FGLSQFESNTWSKAIPNLFHIDLKTAYEQSQPLKNLVADSPKNRMLFQTALALEGLPRHY
STHAAGIVLSEEPLTDTVALQPSGDGLEQTQVPKDDVEALGLLKMDFLGLKNLNILAAAS
HFVARDTGKPFDPKTIPLDDKPTLNLFARGDTNGVFQFESSGIKNVLRKLHPTAFEDVVA
VNALYRPGPMENIDTFIARKNGQEPIAYPDPALTEILKPTYGVLVYQEQVMQVANVMGGF
SLGEADLLRRAMSKKKSAVLAAEQDKFIEGAVKQGFPEETAKTVYAYIDRFANYGFNRSH
AVAYSKVAFWLAYLKVHYPAALFAALMNASMNNLPKLRTYVQEAKARKVGLLGPDINASN
GGFKLSQGKIRFGLLSVKGMRRDFSEAIFTARQNGPFKNLRDLLQRLDPKWLKADNFKSL
ILAGAFDTFDANRAQTLANLDELINSVKLAGNDVGLFSMLAPKTIKVPEMSASERLEAEA
EVLGVYLSGHPVDKYAPLKTQYTLVSVSDLEEGQTVNILLLVRHIKRIRTKTGKPMAFVD
GQDATGNVSLTVFPNLYPTIEDLTTDMVVFVNGRVEKRHDDLQLVVNRIQDAQPLLASLP
SAELFIRLDAKDTALRTDLLKKLQAAHGTTPVITVDTATRESILLDKRYWVKADTTLVEA
LKSQFGANNVVLRTRQES
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atgacgtttacccaattacaggttcatagcaattataccctattacacagcccattggca
ctgcctgatttgattcaggcagccaaaacaaggggttacacggccattgccttaaccgac
accaatgtggtttacggtctggtcgagttttatcgccaggcaaaagctgcagggctaaag
ccgttgctaggcatgcagattgatattgacgatgcccgcttgttagtcattgccgaaaac
aatacgggctatcaccaactcttgaaattatcgacgcaaatcatgctggcgaagacaccg
gttaagtttgctgatttattaccgctgactgggttggccgccattgcgctgccggattcg
ccatttgcggaggccgttacgacgcatcacgatgagcaggcaatggcgtttttaacggct
ttaaaagccaagcagccggcgtcggtttatgtcggtgtggatgaggcgcatcttgacagt
gctattccggcgtttatcgcagcgcaccagcttgaaccgctggcattgggcaatgttctt
tatcgtgacccaaccgatgcctttacgcaaaaagtcatggttgccattgatgaaggcagc
caattaaactttcgtgatccggttttaaccgatgccggtgaagcttggttaaaaccgcca
acagacgctgctgcaccgtttgcagcggctgggctacagacagcggtggatcataccgct
gacattgccgcccgtgccgatgtcaccattgactttaaacagcctcagctgccgcattac
cagacgccggatcagataccgtcgaaagattatttgaccaaactggctaaatccggtctt
gccgctcgttttcatggccagccgattccagaagcttaccagaaacgtttgcaatatgag
ctgcatgtcattattgaaatgggctttgccgattattttctggtggtttgggatgtcatg
aattatgcgcacaaagtgaacatcatgactggcgccgggcgcggttcggcggctggctcg
ttagtgagttatgcgctggccatcaccgaagtcgatccgattgaatataatctgctgttc
gaacgatttttgaatccggcacgggcgcagatgccggatattgatctggatattccagac
aaccgccgcggcgagttaattcagtatgtgcacgacaagtatggcgagaatcacatggct
cagatcattacttttggaacattcggggccaagcaggcgattcgtgatgttgcgcgggta
tttggtttaagtcagtttgaaagtaacacatggagtaaggcaatccctaatttgtttcac
attgatttgaagacagcttatgagcaaagccagccgctcaagaatttggttgccgactca
cccaaaaatcggatgctgtttcaaaccgcgctagccttagaagggctgccgcggcattac
tctacgcatgcggcgggtatcgtgctgtcagaagagccactaactgatactgtggcgctg
cagcccagtggtgacggacttgaacaaactcaggttcccaaggatgacgttgaagcgttg
ggcttgttgaaaatggattttctgggactgaagaaccttaatattttggccgctgccagc
cattttgtggcacgggataccggcaagccgtttgatcccaagaccattccgctggatgac
aaaccgacgctaaacttgtttgcgcgaggcgacaccaatggggttttccagttcgagtct
tccggcattaaaaatgttttgcgaaaattgcacccgactgcatttgaagacgtcgttgcg
gttaatgccttgtatcggcccgggccaatggaaaatatcgatactttcattgctcgcaaa
aacggccaggagccgattgcctacccagatccggcgctgaccgaaatcctcaagccgacc
tatggcgtgctcgtttatcaggagcaggtcatgcaggttgccaacgttatgggcggcttc
agtcttggcgaagcggacttgttacgacgagcgatgagcaagaaaaagtccgcagtactg
gcagccgaacaggacaagtttatcgaaggcgccgttaaacagggattccctgaagaaacg
gccaaaaccgtttacgcctacattgatcggtttgcaaattatggcttcaaccgttcacat
gctgttgcgtatagcaaggttgccttttggctggcttatttaaaagttcattatccggca
gcgctttttgctgccttgatgaatgccagtatgaacaatctgccaaaactgcgcacctac
gttcaagaagccaaggcccggaaagtcggtttgctaggccctgatattaatgccagcaat
ggcggttttaaattaagccaaggaaaaattcgttttggcctgttgtccgtcaaagggatg
cgccgcgactttagcgaagccatttttaccgcccgtcaaaatggcccgtttaaaaactta
cgcgatcttttacaacgattggatcccaagtggctaaaagctgacaactttaaatcattg
attcttgccggggcatttgatacgtttgatgcgaatcgggcgcaaacgctagccaatctg
gacgagttgattaattctgttaaattggcaggcaacgacgtcgggctcttttcgatgttg
gcgcctaaaacaatcaaagtgccggaaatgtccgctagtgagcggcttgaagccgaagcg
gaggttcttggggtttatctatccggacatccggttgataaatatgcgccgttgaaaacc
caatataccttggtgagcgtcagcgatctggaggaagggcagacggtgaacattttgctg
ctggtgcggcatatcaaacgaattcggacgaaaacaggtaaaccgatggcctttgtggac
ggccaggatgcaaccggcaatgtgtcactgacagtttttccgaacctgtatccgacgatc
gaagacttaaccacggatatggtggtattcgtgaacgggcgcgtggaaaagcgtcatgat
gatttgcagctggtggtaaatcggattcaggatgcacaaccgttattagctagcctgcca
agtgccgaattattcattcggctggacgcgaaggatacagctttgcgaaccgatttactg
aaaaaattgcaagccgctcatggaacaacacctgttatcactgtggacactgccactcgt
gaaagtattttgttagacaagcggtactgggtcaaggctgatacaacattggtggaagcc
ttgaagtcacagttcggcgccaacaatgttgtcctaagaacgcgtcaggagtcctag
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integrated database retrieval system
