Lacticaseibacillus parahuelsenbergensis: LACPH_001437
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Entry
LACPH_001437 CDS
T10275
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
lpah Lacticaseibacillus parahuelsenbergensis
Pathway
lpah03410
Base excision repair
lpah03430
Mismatch repair
lpah03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lpah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LACPH_001437 (recJ)
03430 Mismatch repair
LACPH_001437 (recJ)
03440 Homologous recombination
LACPH_001437 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpah03400
]
LACPH_001437 (recJ)
DNA repair and recombination proteins [BR:
lpah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
LACPH_001437 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LACPH_001437 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LACPH_001437 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
WLV79430
LinkDB
All DBs
Position
complement(1531296..1533590)
Genome browser
AA seq
764 aa
AA seq
DB search
MTQYQWQLAAQPDPAAVQQLSQTLGVPAFLAILLWQRGIKDKSDYEAFVHPDISRLHDPF
ALHDMDKAVARILKAIERNEKITIYGDYDVDGLTSSAIMLETLQSLGAEPDVFIPDRFAD
GYGPNAEVYAYLQKTGTQLVITVDNGVAGASVIDPAQEAGMDVVVTDHHELPANLPHAVA
VVHPRHPEGHYPFGDLSGAGVAFKVATALLGEPPLESVDLAALGTIADLVSLTDENRVIA
QLGLKMIQTQPRVGIAAILKEAGVAPETVNETTVGFVIGPRLNALGRMGDANPGVTLLTT
FEEDVAADLAQQVGKLNQERQGLVSKIATEALAMAQTPENQAAKTLLLAKKGWHEGVVGI
VASKVVEATGKPTLIMNITDDGMTAKGSGRSIEAYHLFNALEPVRDKMVAFGGHHMAVGL
TAKTEALPAIHAQMEAAAATMLKTVPKPTLPIAARLENDDLTLAHYELIRQLAPFGQGNP
EPTFSLRPQVIQNVKQIGKENTHLRFQVDNGINVIGFGFGEAAATLVDAQAVKLAVRLDQ
NTWQGNTSLQLMLKDYEVKQPLVIDWRMPSVDGSQFKSSHTYVFFDAKVKQQFERQFSFG
GPTLTAEQVTSPLANAVLVDLPQNRAQLRAVMQQIQPPVAIMFYGAPSHLVAIPTRVEFG
AVLHFLKAHPGFDKHHIPAIAKAVHLTVHQVILAIQVFFELDFVTIDGAFISPVTAPAKK
PLQTAKAYAAREEFLTLAQQLQTMPRAQLEAMLLTEHTDSEVGS
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgacgcagtatcagtggcaactcgccgcacaacccgatccagcagccgttcaacaatta
agccagacattaggcgtgccggcctttttggcgattttgttatggcagcgcggtattaag
gataaatctgactacgaagcgttcgtgcacccggatatcagtcggctgcacgatccgttt
gcgttgcacgacatggataaggcagttgcgcgaatcctgaaagcaattgagcgcaatgaa
aagatcacgatttacggtgactatgacgttgatggcctgacaagcagcgccattatgctt
gaaacattgcagagccttggcgcggaacctgatgtgtttattccggatcggtttgctgac
ggttacggtccgaatgccgaagtctacgcctatttgcaaaaaaccggcacgcaactggtg
atcacggttgataacggggtcgctggagcttctgtgattgatcctgctcaggaagccggg
atggacgttgtggtcacggatcaccatgaactgcccgcaaacctgcctcatgcggtagcg
gtcgtgcacccgcggcatcctgaaggtcattatccttttggcgatctttccggtgctggc
gtggcgtttaaagtggcgaccgcgctgcttggcgagccgccgcttgaaagcgtcgatttg
gctgccttagggacgatcgcggatttggttagtctaaccgatgagaatcgcgtcattgca
cagttgggtttgaaaatgattcaaactcagccgcgggtcgggattgccgcgatcttaaaa
gaggcgggcgttgccccggaaactgtcaacgaaacaacagtcggctttgtgattggtccg
cgactgaatgcactaggacgcatgggcgatgcaaatcccggcgtcaccttgctgacgact
tttgaagaggatgttgcggctgatctggcgcaacaggttggtaaattaaatcaggaacgc
caaggattggtcagcaagattgctacagaagcactggcaatggcacagaccccggaaaac
caagccgccaagaccttgctgctggcgaaaaaaggctggcacgaaggcgttgtcgggatc
gtagccagcaaagtggttgaggcgaccggaaagccgacactgattatgaatatcactgat
gacggtatgactgctaaaggctcgggtcgttccatcgaagcctaccatctttttaacgcc
ttagaaccggttagagacaaaatggtggcgtttggcgggcatcatatggcggttggatta
acagccaagaccgaggcgctaccggcaattcatgcacagatggaggcggctgcagcaacg
atgctcaaaaccgtgccaaagccgacgctgccgattgctgcgcgtctggaaaatgatgat
ttgacgttagcgcattacgaattgattcgccaacttgcgccttttggccagggcaatccc
gaaccaaccttttcacttcggccgcaagtgattcaaaatgtgaagcaaatcggcaaggaa
aacacgcatctccggtttcaggtggataacggcattaatgtcatcggttttggctttggt
gaggccgccgcaacgctggttgatgcccaagccgttaagcttgctgtccgactggatcag
aacacttggcaaggcaatacgagcttgcagctgatgctaaaagattatgaagtcaagcaa
ccgctagtcattgattggcgaatgccttctgttgacggcagccagttcaaaagcagtcac
acctatgtcttttttgatgcgaaagttaagcagcagtttgagcggcaattctcctttggt
ggcccgacgctgacggctgagcaagtcacatcgccgctagccaacgctgttttggttgat
ttaccgcagaatcgtgcacaattgcgggcagtcatgcagcaaatccaaccaccagtcgcc
attatgttttacggcgcacccagtcatttagtagccattccgacgcgcgttgagttcggc
gctgttttgcattttctcaaagcccatcccggttttgacaaacaccatattcctgcgatc
gctaaggctgtgcacttgacggttcatcaggtgatcttggcgattcaggtgttttttgaa
cttgactttgttacaatagatggtgcttttatttctccagtcacagcaccggccaagaag
ccactgcagacggccaaggcttatgcagcgcgcgaggaatttctgacgctcgcgcagcag
ctgcaaaccatgccgcgagcccagttagaagcgatgttgctgacggagcatacagacagt
gaggtaggatcatga
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