KEGG   Lacticaseibacillus parahuelsenbergensis: LACPH_001448
Entry
LACPH_001448      CDS       T10275                                 
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
lpah  Lacticaseibacillus parahuelsenbergensis
Brite
KEGG Orthology (KO) [BR:lpah00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:lpah03016]
    LACPH_001448 (truB)
Enzymes [BR:lpah01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     LACPH_001448 (truB)
Transfer RNA biogenesis [BR:lpah03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    LACPH_001448 (truB)
 Prokaryotic type
    LACPH_001448 (truB)
SSDB
Motif
Pfam: TruB_N TruB_C_2 TruB_C
Other DBs
NCBI-ProteinID: WLV76753
LinkDB
Position
complement(1544705..1545613)
AA seq 302 aa
MNGILPLYKPTGMTSADAVYHARKLLHIKKIGHSGTLDPNVDGVLPLAIGAATKAVPQLM
ASGKIYTGEITLGFATTTEDLDGEVVKRTPLVKPVPVHELDQVLTQWTGEITQVPPMFSA
VKVNGRRLYEYARAGESVERPKRQVTVKRFERTSEPIFDATQGIQRFRFEAAVSKGTYIR
TLAVDVGQSLGVAAVMSQLTRIKSGGFTLAQAVSLEALGQHIADGTLASVIQPIDIAFAE
LPKVDLTADQYDDVRHGRFLTLQLDGPRVRLHYDGVLKAIYRFEKHQYRPDIMFLANEKN
ER
NT seq 909 nt   +upstreamnt  +downstreamnt
atgaacggcattcttccgctgtataaaccgaccggcatgaccagtgccgatgccgtttat
catgcacgcaagcttcttcacattaaaaaaatcggtcattccggcacgcttgacccaaac
gttgacggtgttttgccgctcgcgattggcgcggcaaccaaagctgtgccccaattaatg
gccagtggcaaaatttataccggcgaaatcacccttggttttgccacgaccactgaagat
cttgatggcgaggtggtgaaacgaacgccgctggtgaagccggtaccggtacatgaactg
gatcaggtgctcacgcaatggacaggtgaaattacccaagtaccgccgatgttttccgca
gtcaaagtcaatggcagacggttgtatgaatatgcccgggcaggtgagtcggttgaacgg
ccaaaacgtcaggtaacggtaaaacgctttgagcgaaccagtgaaccgattttcgacgca
actcaagggatccaacgttttcgttttgaggctgcggtgtctaagggaacctatatccga
accttggcagttgatgttggccaatcgctaggcgtcgctgcggtaatgagccaattgacg
cggattaaaagcggcggctttacattagcccaagcggtcagtcttgaagccttggggcaa
catattgctgacggcaccttagcgtcagtgatccaaccgattgatattgcgtttgctgag
ttgccgaaagttgatttgacagccgaccagtatgacgatgtccgacacggccgatttttg
acccttcagttggatggaccacgggttcggctgcattacgatggcgttttgaaagccatt
tatcggttcgaaaaacaccagtatcgcccggatattatgtttttagcaaatgagaagaat
gagagataa

DBGET integrated database retrieval system