Lactobacillus panisapium: GYM71_01195
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Entry
GYM71_01195 CDS
T07602
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lpai
Lactobacillus panisapium
Pathway
lpai03420
Nucleotide excision repair
lpai03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lpai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GYM71_01195
03430 Mismatch repair
GYM71_01195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpai03400
]
GYM71_01195
Enzymes [BR:
lpai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GYM71_01195
DNA repair and recombination proteins [BR:
lpai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GYM71_01195
MMR (mismatch excision repair)
Other MMR factors
GYM71_01195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C_2
AAA_19
AAA_22
UvrD_C
Viral_helicase1
Catalase_C
NACHT
AAA_30
DUF3463
DEAD
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QYN52123
LinkDB
All DBs
Position
260060..262354
Genome browser
AA seq
764 aa
AA seq
DB search
MLNATDDKKFEQKHLDQILKMVRAKKAELSSSIKSAEGEAKDINSHFFDDVKLDYDGYST
SMETALSIHQQQQLLDERENAWQHAARQLSTIQKLEKKPYFARVDFKENGQKPETIYIGL
GSFADKNNHFLIYDWRAPISSIYYDGKLGDVSYHSPEGEITVEMTKKRQFMIDDGQIVNM
FDTNESIGDQMLLEVLGEKSSTQMKSIVTTIQREQNKIIRNTDADLLFVQGAAGSGKTSA
ILQRIAFLLYRYRGNLTSSNVIMFSPNQLFNDYIKNVLPEMGEQNMVQMTYWQFVARRLP
GMSVENLFDQFEDAAADSAISRFKDSTNFFDLLTRYAKHLNRRGMVFKNIYFRDKKRPFF
TKEKIGEIYYSFNSNYNLNNRIDATREDLIKMLNRKISSESKKAWVSDAIQSLSQEQLNQ
LYDRPDQEFESEEKEEKFLSRKIVVKALDKVFQQIRRNNFINMRAQYLSFLRAVPKMTDL
AKWEITENDWRDHVNQVKESFKKHYMHMNDVSAYLYLYDLITGRHVDYEMRYAFIDEIQD
YTPFQLCYLKYNFPRAKFTMLGDLNQAIFTKDESKSLLKQISGLFDPEKTDVVQLTKSYR
STKQLTDFTKQILRQGEKIESFNRQGPKPVLWGRENDQQAIALLQKILADNDQEQLTTAV
ITKDLEQAKFVADKLKQAGVKATLIATANQRLVEGTLIIPSYLAKGLEFDAVIMWGASRE
NYHRTDETQLVYTITSRAMYKLDVVYVGQRSPLLDVDPQTFIEK
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgttaaacgcgacagatgataaaaaatttgaacaaaaacatctcgatcaaatcttaaaa
atggttcgagcaaagaaggcggaattatcctcgtcaattaagtcggcagaaggcgaagcc
aaagatattaattcgcatttttttgacgatgtgaaattggattatgatggctactcgact
tcaatggaaaccgcattatccattcatcaacagcagcaactgctcgatgaacgtgagaat
gcatggcagcatgccgctagacaactgagtacgattcaaaaacttgaaaaaaagccctat
tttgcccgggtagatttcaaagaaaatgggcaaaaacctgagactatttatattggctta
ggttcatttgctgataaaaataatcactttttgatttatgattggcgggcaccaatttcc
tctatttactatgatggaaaactgggagatgtttcataccattcaccagaaggtgagatt
acggttgaaatgaccaaaaagcggcaattcatgattgatgatggtcaaatagttaacatg
tttgacactaatgaatcaattggtgatcaaatgcttttagaagtgctgggcgaaaaatcc
agtacgcagatgaagtcaatcgtaactaccattcagcgtgagcaaaataagattattaga
aatactgacgctgacttgttatttgttcaaggcgcagccggatcgggaaagacttccgcc
atcttgcagcgaattgcctttctgctttatcgctatcggggcaacttgactagtagcaac
gtcattatgtttagtccgaatcaattatttaatgactatatcaaaaatgttctgccagaa
atgggtgaacaaaatatggtccaaatgacttattggcagtttgttgcccggcgtttaccg
ggaatgagcgttgaaaacctctttgaccaattcgaagatgcggctgctgattctgcgatt
agtcgttttaaagattcaactaatttctttgacctcttaacgcgctatgctaaacacctc
aatcgtcggggtatggtttttaaaaacatttactttcgggacaagaagcggccatttttt
actaaagaaaaaattggtgaaatctattattcatttaattccaattacaacttgaataac
cggattgatgcaacgcgtgaagatttaatcaagatgttgaaccgtaaaataagctctgag
agcaaaaaggcgtgggtgtcagatgcaattcaaagtttgagccaagagcagcttaaccag
ttgtatgaccgcccggatcaggagtttgaatctgaagaaaaagaagagaaattcttgagc
cgcaaaattgttgtgaaggctttagataaggtgttccagcaaattcgacgcaacaacttt
atcaacatgcgggcacagtacctgagcttcttacgtgcagtgccaaaaatgacggatttg
gctaaatgggaaattacggaaaacgactggcgtgatcacgttaatcaggtcaaggaaagc
tttaaaaagcattacatgcatatgaacgatgtttcagcctacctttacctttatgacctg
attacggggcggcacgtcgattatgaaatgcgctatgcctttattgatgaaattcaggac
tatacaccatttcagctttgctaccttaaatacaacttcccccgggcgaaatttacaatg
ctcggtgatttgaaccaagcgatttttactaaagacgaaagtaagagtctgctaaaacaa
atcagtggcttgtttgatcctgaaaaaactgatgttgttcagctgacaaagtcttaccgt
tcaactaagcagcttactgatttcaccaagcagattttacgtcaaggtgaaaaaattgag
tctttcaaccggcaggggccaaaaccagtgctctggggccgggagaatgatcaacaggca
attgcactactccaaaagattttggcagataatgatcaagagcaattgaccaccgccgtt
attaccaaagaccttgaacaagcaaaatttgttgctgacaagctaaaacaagctggcgtt
aaggctaccctgattgcaactgccaatcagcgcttagtcgagggaacactgatcattccg
tcatatcttgctaaggggcttgagtttgatgccgttatcatgtggggagcttcccgcgaa
aattatcatcgaactgatgaaacccaattagtctatacgattacttctcgggcaatgtat
aaactagatgttgtctatgttggtcaaagaagtccgctgcttgatgttgacccgcagact
tttattgaaaaatag
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