Lactobacillus panisapium: GYM71_03135
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Entry
GYM71_03135 CDS
T07602
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lpai
Lactobacillus panisapium
Pathway
lpai03420
Nucleotide excision repair
lpai03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lpai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GYM71_03135 (pcrA)
03430 Mismatch repair
GYM71_03135 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpai03400
]
GYM71_03135 (pcrA)
Enzymes [BR:
lpai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GYM71_03135 (pcrA)
DNA repair and recombination proteins [BR:
lpai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GYM71_03135 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
GYM71_03135 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
AAA_12
YMR265C_C
ResIII
T2SSE
YjbT
Motif
Other DBs
NCBI-ProteinID:
QYN52453
LinkDB
All DBs
Position
625342..627585
Genome browser
AA seq
747 aa
AA seq
DB search
MSEEAILTGLNEQQQKAVQITEGPLLVVAGAGSGKTSVLTRRIAYLVEEKQVLPWNILAI
TFTNKAATEMREREQKLLGPQANDIWMSTFHALCVRILRRDADKIGYGSNFSIADSSEQL
TLIKHIEKEQNLNPKVYEPRRVLSAISNAKNDLLTPDAFAASSSTPFDKVAAQVYREYQR
RLKHDQIMDFDDLIMQTLVLFKTDQAVLHYYQNKFRYLLVDEYQDTNQAQYELCHELAAQ
YKNICVVGDADQSIYGWRGANMENIMNFENDYKDAGVQTVKLEQNYRSTGHILSAANAVI
ENNHNRKAKKLWTDQGDGDKVTYYRAQSGDDEAHFIISKIQEEVNDHNRSYHDFAVLYRT
NAQSRTVEEAFVKSNVPYQIVGGHKFYDRKEIMDIMAYLKLVANPSDSMSFNRIINTPKR
GIGNVSVEKFTTFARDNNLSLLDAFSHLTMTGLTVRAANKLSDFGAKLRDAIEYAKDHSV
TGLTEKILQDFGYTDALKAEKTIEAETRLENLDEFLSVTKRFDDQYEPEDDESNALSDFL
AEVSLLSDQDDLANNDDQVALMTLHAAKGLEFPVVFLVGMEDGLFPLSRALLEDDQLEEE
RRLAYVGITRAKRKLYLTNAYSRMMYGRMQNNPPSRFLDEIDLADLETENAAAPSMADSN
FQVQTAPFANVDERARAQVYTPKVKPAGAVGAEKKGWNVGDQVEHKAWGRGVVAKVNGTG
EDMELDIAFPNIGIKRLLAAFAPIKKV
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagaagcaattttaacaggattaaacgagcaacagcaaaaagctgtccagatt
actgaggggccattattggttgttgccggtgcgggatcaggcaagacctctgttttaacc
aggcgaatcgcctatctcgtcgaagaaaagcaggttctgccgtggaatattttggcaatt
acttttactaataaggctgctactgaaatgcgcgaacgggaacaaaaattactcgggccg
caggcaaatgacatttggatgtcgacttttcacgctctttgtgttcgaattttacggcgt
gatgctgataaaatcggttatggcagtaatttctcaattgctgattcatctgaacaatta
acactaattaagcacattgaaaaagagcagaatctcaatcctaaggtgtatgaaccgcga
cgcgtattatccgctatttctaatgctaaaaatgatttattaactcctgatgcctttgcc
gctagtagctcgaccccgtttgacaaggttgctgcacaagtatatcgagaataccaaagg
cggttaaagcatgaccagattatggactttgatgatttgattatgcagactttagtttta
tttaaaacggatcaggcagttttacactattatcaaaataaatttcgctatttgcttgtg
gatgagtatcaggatactaaccaggcgcagtatgaactctgtcatgaattagctgcccag
tataaaaatatttgcgttgtcggtgatgccgatcagtccatttatggctggcgcggagca
aatatggaaaacatcatgaacttcgaaaatgactacaaagatgctggcgtccaaacagtt
aagctagagcaaaattaccgctcaactggtcatattctttcagccgctaatgccgtgatt
gagaacaatcataaccgaaaagccaagaaattatggacagaccagggagacggggataag
gttacttattaccgtgcccaaagtggtgacgatgaggcgcatttcatcatttcaaagatt
caagaagaggttaatgatcataatcgctcttaccacgattttgctgttttgtaccggaca
aatgctcaatcgcgaacagtcgaagaagcctttgttaagtctaatgttccttaccaaatt
gtcggcggccataaattctacgatcgcaaagaaattatggatattatggcatatcttaaa
ttagtggctaatcccagtgattcgatgagttttaaccggattattaatacgccaaaaaga
ggtatcggcaatgtcagtgtggaaaagtttacgacttttgctcgtgacaataatttgtca
cttcttgatgcatttagccacttgacaatgaccggcttaaccgtcagagcagccaataaa
ttaagtgattttggtgcaaaactgcgtgatgccattgagtatgctaaagatcacagtgtg
accggcttaacggaaaagattttgcaggattttggttatactgatgcgctaaaggctgaa
aaaacgattgaagccgaaacaagacttgaaaacttggatgaatttctttctgtaactaag
cgtttcgatgatcaatatgagccagaagatgatgagtcaaacgcactgagtgattttttg
gctgaagtttcgctgttaagtgatcaggatgacctggctaacaatgatgatcaagtggca
ttaatgacacttcatgcggctaagggactggaatttcctgttgtcttcttggtaggaatg
gaagacggactgttcccactttcacgtgcacttttagaagatgatcagctagaagaagaa
cgcagactggcttatgtcggcattacccgtgctaagcggaaattatatctaactaatgct
tactctagaatgatgtatggcagaatgcagaacaatccaccatcaagatttttggatgag
atcgacctagctgatttagaaacagaaaatgcggctgctccaagtatggctgatagcaat
tttcaagttcaaacggctccgtttgcaaatgttgatgagcgtgcccgtgcgcaagtttat
actccaaaggtcaagcctgcaggtgctgtgggggctgagaaaaaaggttggaatgttggc
gatcaagttgaacataaggcttggggacgcggagtcgttgccaaggttaatggtactggt
gaagacatggagcttgatatcgcttttccaaatattggaatcaagcgccttctagcagca
tttgccccaattaaaaaggtataa
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