Lactobacillus panisapium: GYM71_03880
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Entry
GYM71_03880 CDS
T07602
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
lpai
Lactobacillus panisapium
Pathway
lpai03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lpai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GYM71_03880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpai03400
]
GYM71_03880
Enzymes [BR:
lpai01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
GYM71_03880
DNA repair and recombination proteins [BR:
lpai03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GYM71_03880
Prokaryotic type
GYM71_03880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
PTHB1_CtH
Motif
Other DBs
NCBI-ProteinID:
QYN52594
LinkDB
All DBs
Position
785649..786344
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AA seq
231 aa
AA seq
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MKKFIGNDWDEVLAPIFDSNEYHELHEFLKTEYKTKRIFPDMYHIFTAFKLTPFAKTKVV
ILGQDPYHNPGQATGMSFAVMPGVKLPPSLQNIYKELYDDVGCVPVQHGYLKKWADQGVL
LLNAVLTVPYGHANGHQGKGWENVTDAAIKALSDRGEVVFILWGRYAQNKIALIDLDRNF
VIKSAHPSPFSADRGFFGSRPFSRCNEALKKFGKTPIDWQLPQQVTQSDLV
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatttattggtaatgactgggacgaagtattggctcctatatttgacagtaac
gaatatcatgaattacatgaattcttaaaaacagagtacaaaactaagcggatattccca
gatatgtatcatatttttactgcttttaagttaaccccttttgctaaaacaaaagtagtc
attttaggtcaggatccctatcacaatcctggtcaggcaacaggaatgagctttgctgta
atgcctggagtaaagttgccaccgtcattacaaaatatttataaagaactatatgatgat
gtcggctgtgtgccggttcaacatggttatttgaaaaaatgggctgatcaaggagtgctc
cttttgaacgcagttttaacagttccttatggtcatgctaatggtcatcaaggtaaaggc
tgggaaaatgtaacggatgctgccatcaaggctttgagcgatcggggagaagtagttttc
attctttggggacgatatgctcaaaataaaattgcattaattgaccttgaccgtaatttt
gtgattaaatcagctcaccccagtccattttcggcagatcgtggcttttttggctcacgg
ccattttctcgttgtaacgaggccctgaagaagtttgggaaaaccccaattgactggcaa
ttaccgcaacaagtaacacaatcagatttagtatag
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