KEGG   Lactobacillus panisapium: GYM71_03895
Entry
GYM71_03895       CDS       T07602                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
lpai  Lactobacillus panisapium
Pathway
lpai03030  DNA replication
lpai03430  Mismatch repair
lpai03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lpai00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    GYM71_03895
   03430 Mismatch repair
    GYM71_03895
   03440 Homologous recombination
    GYM71_03895
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lpai03032]
    GYM71_03895
   03400 DNA repair and recombination proteins [BR:lpai03400]
    GYM71_03895
Enzymes [BR:lpai01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     GYM71_03895
DNA replication proteins [BR:lpai03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     GYM71_03895
DNA repair and recombination proteins [BR:lpai03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     GYM71_03895
SSDB
Motif
Pfam: RNase_T Rv2179c-like DEDDh_C
Other DBs
NCBI-ProteinID: QYN52597
UniProt: A0ABX8W544
LinkDB
Position
complement(787860..788393)
AA seq 177 aa
MNFIAMDFETANRHPESACSLALVMVRNNKIVDRFYTVINPQMPFDARNIEVHDITADDV
KDAPTMAEVWPHIKRLYQPGMLVCAHNARFDTNVMRQSLGRYDIQEPHYFVIDTLQTSKL
FEPDLPNHKLDTVSDALDVELWHHHNALSDSEACAGILIAQNEQFGDEAIKNLVYQV
NT seq 534 nt   +upstreamnt  +downstreamnt
atgaattttatcgcaatggactttgagaccgctaaccgtcacccagaaagtgcttgttca
ttagcattggtgatggtgcggaataataaaattgttgaccgtttttatactgttattaat
ccccaaatgccatttgatgcccgtaatattgaagtacatgatattacagccgatgacgtt
aaagatgcccctactatggctgaagtttggccccacattaagcggctttatcaacctggt
atgctcgtttgtgcgcataacgcccgctttgatactaatgttatgcgtcaaagtttaggt
cgttacgatattcaggaaccgcattactttgtcattgacacgttgcagaccagcaaactg
tttgaaccagatctgcctaaccataaattagatactgtttctgatgctttagatgtcgaa
ttatggcatcaccacaatgcacttagtgacagcgaagcatgtgctggtattttaattgcg
caaaatgagcagtttggggatgaagcaattaaaaatttggtttatcaagtttaa

DBGET integrated database retrieval system