Lactobacillus panisapium: GYM71_04595
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Entry
GYM71_04595 CDS
T07602
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
lpai
Lactobacillus panisapium
Pathway
lpai03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lpai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GYM71_04595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpai03400
]
GYM71_04595
Enzymes [BR:
lpai01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
GYM71_04595
DNA repair and recombination proteins [BR:
lpai03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GYM71_04595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
AAA_11
Viral_helicase1
UvrD_C
HHH_5
UvrD-helicase
RsgA_GTPase
AAA_22
AAA
PIF1
SLFN-g3_helicase
AAA_12
nSTAND3
Herpes_Helicase
AAA_5
NTPase_1
AAA_28
GrpE
GMT-wHTH
T2SSE
CemA
AAA_29
Motif
Other DBs
NCBI-ProteinID:
QYN52728
LinkDB
All DBs
Position
974597..976954
Genome browser
AA seq
785 aa
AA seq
DB search
MTKFNGKLNRIVFENDQDLFKILDVTIIGKLEDYDREEIKVTGSFGDIQEGGTYTFDGKL
VVHNKFGLQFRCDSYKQSVPQEKGSLTRYLSSSKFPGIGKKAADTIISALGTNALTVLKD
NPAKVATLPLTKKQKDSLISGVNSMDSYSEIVLKLAQFGLNKKVAARLYQIYHGETLAKL
EQDPYAAIAEVTGYAFKSADRMGSKLGIAADDPRRINGAIFQILLDELSKEGNTFVKLAL
LLTQASKLLQIKQFDPIATCVNNLQHQGKIVVSGEDAALQSIFETENEIALTMKNLIERK
NTTKPYKERAIQTAIKNAEKKLKISYDDTQKLAIKNALTNPISILTGGPGTGKTTIINGI
LLSLRELAEIPASSLYSSDPPFLLAAPTGRAAKRMEEITGITAKTIHRMLGLGIGENDAT
DLNELNGEILIIDEMSMVDMFLFKQLISSINDTKHIVFVGDKDQLPSVGAGNVFSDLIKA
NAFPTTVLKQIHRQGDDSSIITLAHDINEGEDQQSLFTKTKNYSFISCPPHEVDHVVSQI
VERAIAHGFAKDDIQVLGAMYQGPGGVTNLNNVIQEIMNPAKPNSKILEVHDEAFRIGDR
VLQLQNNPEKDIYNGQIGKILAIDEKNPQKCMTADFDGREINFSKKDLFDLTRAYAITIH
KAQGSEFPLVILSLTMQNYVMLKRNLLYTAVTRAEKNLVLIGDPRAYVMALNTSGNDRQT
GLSQKLQGQLGVVSQTIPEKKVETPKVDEQVEEKPKDYLLTSELIYAGKIDPMIGMADIK
PGMKH
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgactaagtttaacggtaaattaaatcgaatagtttttgaaaacgatcaggatcttttt
aaaattcttgatgtaactatcattggtaaactagaagattatgatcgagaagaaattaaa
gttactggtagttttggcgatattcaggaaggtggaacttacacttttgacggcaagcta
gtcgtacataataaatttggcttgcaatttcgctgtgacagctataagcaatcagttccg
caagaaaaaggaagtttaacacgctatttaagttccagtaaatttccgggaattgggaaa
aaggctgcggatactatcatctcagctttaggaacaaatgctttaaccgtgttaaaagat
aatccggctaaagtggccacattgccattaaccaaaaagcaaaaggacagtttgatttcg
ggtgttaattcaatggactcatactcagagattgttcttaaattagcacaatttggctta
aataaaaaagtggcagctagactgtatcaaatttatcacggtgaaactctagctaaattg
gagcaagatccgtatgcagcgattgcagaagttacaggctatgcgtttaaaagtgctgat
agaatgggcagtaaattgggaattgctgccgatgatccgcgacgtattaatggtgcaatt
ttccaaattttactcgatgaactaagtaaagagggaaatacctttgtaaagttggcgtta
cttctaacgcaagcaagtaagttattacaaattaaacaatttgatcccattgctacgtgc
gttaacaatctccagcaccagggcaaaattgttgtatctggtgaagatgctgcattgcag
tctatttttgagactgaaaacgaaattgctctcacgatgaagaatctgattgagcggaag
aataccaccaaaccatataaggaacgagcaattcaaacggccataaaaaatgctgagaag
aaattaaaaattagctatgacgacacccaaaagctggccattaaaaatgctttaactaat
ccgatttcgattctgacaggtggcccgggaacaggtaagacaactattattaatggtatt
ttactttcattgcgagagctggctgaaattcctgcttcgtctttatatagtagcgatccg
ccttttttgctagctgctccaacaggtcgggctgctaaaagaatggaagagattaccggt
attacggccaagaccattcacaggatgttgggattaggaattggtgaaaacgacgctact
gatttaaacgaattaaacggcgaaattttaattatcgatgaaatgtctatggttgacatg
tttttgtttaagcaactgatttctagcatcaatgatacaaagcatatcgtttttgttggg
gataaggaccaattgccatcagttggtgcaggcaatgtctttagtgatttaattaaggct
aatgcttttcctacaactgttttaaagcaaatccaccgtcaaggagacgactcgagtatt
attacgttggctcatgatattaatgagggtgaagatcagcaatctttgtttactaaaact
aaaaattattctttcatttcttgtccgccgcatgaagttgatcatgtagtaagccaaata
gttgaaagagctattgcccatggttttgctaaagatgacattcaagtcttaggtgccatg
tatcaaggaccaggtggagtaaccaatctgaataatgttatacaggaaattatgaatccg
gctaaacctaacagtaaaatcctcgaagttcatgatgaagcttttcggataggggatcgg
gttttacagttacaaaataatcctgaaaaagatatatataatggtcaaattggtaaaatt
ttagcgattgatgaaaaaaatccgcaaaagtgtatgactgcagactttgatgggcgggaa
ataaactttagcaaaaaagatttatttgatttgaccagagcttatgcaataacaattcat
aaggcccaaggttcggaatttccactagtaattttgagtttaacaatgcaaaattatgtt
atgttgaaacggaatctgctgtacactgcggttacgcgtgccgaaaaaaacttggtttta
attggcgatcctcgggcgtatgtaatggcgcttaatacttctggtaatgatcggcaaact
ggtttaagtcagaaattgcaagggcaattaggcgttgttagtcagacaatccctgagaaa
aaggtggaaacaccaaaagtagacgagcaggtagaagaaaagcctaaagattatttactt
acttctgaattaatttacgctggtaaaatcgacccaatgattggaatggctgatattaag
ccaggaatgaagcattaa
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