Lactobacillus panisapium: GYM71_04910
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Entry
GYM71_04910 CDS
T07602
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lpai
Lactobacillus panisapium
Brite
KEGG Orthology (KO) [BR:
lpai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lpai03032
]
GYM71_04910 (topA)
03400 DNA repair and recombination proteins [BR:
lpai03400
]
GYM71_04910 (topA)
Enzymes [BR:
lpai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
GYM71_04910 (topA)
DNA replication proteins [BR:
lpai03032
]
Prokaryotic type
DNA Topoisomerases
GYM71_04910 (topA)
DNA repair and recombination proteins [BR:
lpai03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GYM71_04910 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Toprim_2
UBA_N4BP1
Toprim_3
C1_2
Motif
Other DBs
NCBI-ProteinID:
QYN52789
LinkDB
All DBs
Position
1039206..1041311
Genome browser
AA seq
701 aa
AA seq
DB search
MPTKSKPKKRKKTLVIVESPAKAKTIEKYLGRNYRVIASKGHIRDLPKSQMGIDFDHDYK
PKYISIRGKGDTIKELKSEAKKAKDVYLASDPDREGEAIAWHVAHALNLDDTAKNRVTFN
EVTKDAVKNSFKNPRAIDMDTVNAQQARRILDRIVGYSLSPILWDKVKKGLSAGRVQSVA
LKLVIDREKEIKNFKPEEYWTIDAEFKKKTKAFKAQFWGVDGKKQDLPNNEAVQKVLAKI
DKKQAFQVNNVVKRERRRQPAAPFTTSTMQQEANKRLNYRTRRTMSIAQQLYEGISLGKQ
GTVGLITYMRTDSKRTSPIAQAEASKFLNEKYGKEYAAKGARHFKNQEDAQDAHEAIRPT
SVYRTPESLKDVLTTEQYRLYKLIWSRFLASEMTPAVYDTVRADIEQNGVIFRTTGSKMK
FAGFTKVYDNLQEKNVELPELDDGDQVKLAKSDNKQHFTLPPARYTEASLVHTLEENGVG
RPSTYAPTIDTIQRRYYVKLEGKAIVPTELGEIVDNLIEKFFPDIVNIDFTAQLESDLDS
IEAGKKNWVKVIDEYYHPFKKELDKAESGIQKVQIKDEPAGFNCDICGAPMVIKMGRYGK
FYACSRFPDCRNTKAIVKKVGVICPKCGKGDVVEKKSKRNRKFYGCSRYPDCDFVSWDKP
INRVCPNDGHFLVEKKNKKGLVILCPNGDYKEEPKEEQTAK
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgccaacaaaatcaaagccaaaaaaacgtaaaaaaacattagtgatcgttgagtcgccg
gctaaggctaagactattgaaaaatatctcggacgtaattatcgcgtcattgcatcgaaa
ggccatattcgtgatttacctaagtcacaaatgggaattgattttgatcatgattacaaa
ccgaaatatatttcgattcggggtaaaggcgacacgattaaagaattaaaatctgaggct
aagaaagctaaagatgtttacctagcatctgaccccgatcgtgaaggagaagcaattgcg
tggcatgtggctcatgccttaaatctggatgatacggctaagaaccgggttacttttaac
gaagttaccaaggatgctgttaaaaacagttttaaaaatccccgtgccattgatatggat
acggtaaatgctcagcaggccagaagaatcctagatcgaattgtaggatattctttatcg
ccaattctatgggataaggtgaaaaaaggacttagtgcaggacgtgttcagtctgttgct
cttaagttggtaattgaccgcgaaaaggaaattaaaaactttaagcccgaagaatactgg
acaattgatgccgagttcaaaaagaaaactaaggcgtttaaggcacaattctggggcgtc
gatggcaaaaagcaggatttgccgaataatgaagccgtgcaaaaagttctagcaaaaatt
gataaaaagcaggcttttcaagttaataatgtcgttaagcgtgaacgtcggcggcaacct
gctgcaccgtttacgacttcaactatgcagcaagaagctaataagcgtctaaattatcgg
acgcgcagaaccatgagtattgcacagcagttatatgaaggtattagtctgggcaaacag
ggcacagtcggtctaatcacctatatgagaacggactctaaaaggacatccccaattgct
caagctgaagcatctaagttcctaaatgaaaaatacggcaaagaatatgctgccaaaggt
gcaagacactttaaaaatcaggaagatgcgcaggatgcccatgaagcaattcggcctaca
agtgtttaccggacacccgaatctttaaaggatgttttaactaccgaacaatatcgtctt
tacaaactgatttggtcccgctttttagccagtgaaatgacgcctgctgtttacgatacc
gtaagagctgacattgaacaaaatggggtaattttccggacgactggttcgaaaatgaag
tttgctggtttcaccaaggtttatgataatttgcaggaaaaaaatgtagaattacctgaa
ctagatgatggtgatcaagttaagttagcaaaatccgataacaagcagcattttacgttg
ccgcctgcacgctacacggaagccagtttagttcatacactggaagaaaatggtgtcggg
cgtccgtcaacctacgcgccaacgatcgatacgattcagcgtcgctattatgtcaagctt
gagggtaaagcaatagtacctactgaattaggagagattgtcgataacttaatcgaaaaa
ttcttcccggatattgttaacattgattttaccgcccaattagaaagcgacctcgatagc
attgaggcagggaagaaaaattgggtcaaggtaattgacgaatattatcacccgtttaaa
aaggaattagataaagccgagtcaggcattcaaaaagttcagattaaggatgaacctgct
ggttttaactgcgatatctgtggtgcgccgatggtgatcaagatgggacgctatggtaag
ttctacgcctgctcacgttttcctgattgccgcaacactaaggcaattgtgaaaaaggtc
ggtgtaatctgtccgaaatgcggtaaaggtgatgtagttgagaagaagtctaagcgcaac
cgcaaattctatggctgctctcgctaccctgactgtgattttgtttcctgggacaagccg
attaaccgtgtctgccctaatgacggtcatttcttagtggaaaagaaaaacaaaaaaggt
ctggttattttatgtccaaatggtgactataaagaagagcctaaggaagaacagaccgca
aaataa
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