Lactobacillus panisapium: GYM71_05720
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Entry
GYM71_05720 CDS
T07602
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lpai
Lactobacillus panisapium
Brite
KEGG Orthology (KO) [BR:
lpai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lpai03016
]
GYM71_05720 (truB)
Enzymes [BR:
lpai01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
GYM71_05720 (truB)
Transfer RNA biogenesis [BR:
lpai03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GYM71_05720 (truB)
Prokaryotic type
GYM71_05720 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
QYN52943
UniProt:
A0ABX8W612
LinkDB
All DBs
Position
complement(1213390..1214283)
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AA seq
297 aa
AA seq
DB search
MINGILVVDKDKGMTSADVVYHLRKALHIRKIGHAGTLDPDVTGVLPIAIGQATKLIELM
HTQNKKYVGTAILGYATDSYDISGKVLKSQKLTDPIAKEEIEQQMKKFVGQIEQVPPIYS
AVRVNGKHLYEYAREGIEVDRPKRQVQIFAYDTMSEPVFDSKTGFQEFDFQIECSKGTYV
RSLVNDLGTRLGVPAVMKTLRRTASSGFTIDQAVKLDQIIAHPDEVTNFIQPIDAFFKDY
ETCDLTSGQWLKVKNGNSIPLKTNAKKVALRYNNSVKAIYQKDDAVYRPDLMLLQNE
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgataaatggaattttagtggttgataaagacaaaggcatgaccagtgctgacgtcgtc
taccatttacgtaaagcccttcatattaggaaaatcggtcatgctggtactttggatccc
gatgtaactggtgttttgccaatagcgattggtcaggctaccaagttaattgaactaatg
catacgcaaaataagaaatatgtgggaacagctattttaggctatgctactgatagctat
gatataagtggcaaggttctcaagagtcagaagttgactgatccgattgcaaaagaagaa
attgaacagcaaatgaaaaaatttgttggccaaattgaacaagtaccaccaatttattca
gctgtccgggttaatggtaagcatctatatgaatacgctcgtgagggtatcgaagtagac
cggccaaaaaggcaagtgcaaatttttgcctatgatactatgtctgaaccggtatttgat
tcaaaaaccggttttcaagaatttgattttcaaattgaatgcagtaaaggtacatatgta
agatcccttgttaatgacttaggcacccggctcggggttccagccgtgatgaaaacatta
cgccggactgcaagttctggttttaccattgatcaagcggttaaacttgatcaaattatt
gctcatcctgatgaagtgaccaactttattcaaccaattgatgccttttttaaggactat
gaaacttgcgatttaactagtggtcaatggctgaaagtaaaaaatggcaattcaatccct
ttgaaaacgaatgcaaaaaaggttgcattaaggtacaataatagcgttaaagcaatctat
caaaaggatgatgctgtttatcgccctgatttgatgctgttacaaaacgaatag
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