Lactobacillus panisapium: GYM71_05965
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Entry
GYM71_05965 CDS
T07602
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
lpai
Lactobacillus panisapium
Pathway
lpai02024
Quorum sensing
lpai03060
Protein export
lpai03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
lpai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
GYM71_05965 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
GYM71_05965 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GYM71_05965 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
lpai02044
]
GYM71_05965 (ffh)
Enzymes [BR:
lpai01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
GYM71_05965 (ffh)
Secretion system [BR:
lpai02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
GYM71_05965 (ffh)
Eukaryotic Sec-SRP protein
GYM71_05965 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
Zeta_toxin
AAA_22
AAA_17
AAA_16
AAA_33
CbiA
cobW
DO-GTPase1
AAA_19
MMR_HSR1
ResIII
AAA_18
AAA_28
AAA
6PF2K
MutL
Lyase_catalyt
CLP1_P
AAA_30
Fe-ADH
AAA_24
AAA_14
APS_kinase
hnRNP_Q_AcD
DUF929
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QYN52991
UniProt:
A0ABX8W807
LinkDB
All DBs
Position
complement(1262215..1263642)
Genome browser
AA seq
475 aa
AA seq
DB search
MAFENLSERIQKALRNLTGKGKISEEDINTASREIRLALLEADVNFKVVKDFIKKIKKEA
LGKEVQESLNPGQQVIKIVNDELTKMMGESAATLNKSKHIPTIIMMVGLQGTGKTTTVGK
LAKRLIDKDKARPLLIAGDIYRPAAIDQLEQIGEQLNVPVYSEHDEKNVAKIVENGLKQA
DDNKNDYVIIDTAGRLEIDEPLMEELEQVKKVAQPDNILLVVDAMTGQAATDVAKGFDSR
LDITGVILTKLDGDTRGGAALSIRAVTGKPIIYTGQGEKLSDLEQFHPDRMASRILGMGD
MLTLIEKAQQDYDAKKAEEVAEKMKENTFDFNDFVDQLEQVEKMGPLDQLIKMIPGMANN
PQLKNMNFDKKQIVYVKAIISSMTEAERENPELLNPSRRRRIAAGSGRPIVEVNRMIKQF
KQARDMMSKITKGNLKGMGNLPGMDSPMGKIAMRRMGKKFKKNKKKRMKVKRYHS
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggcttttgaaaatttaagtgaacgaattcaaaaagcgttacgcaacctaactggcaaa
ggtaaaatttccgaagaagatatcaatactgctagccgagaaattagattggcattgtta
gaggccgatgttaattttaaagttgtcaaagacttcattaaaaagattaagaaagaggct
ctgggcaaagaagttcaggaaagcctgaatcctggtcagcaagtaattaagattgttaac
gatgaactgaccaagatgatgggtgagagtgcagccactcttaacaagtccaagcatatt
ccgacgatcattatgatggttggtcttcagggtaccggtaagacgactacggtgggtaaa
ttagctaagcggttaattgataaggataaagctcgtccattgctaattgccggtgatatt
tatcgtcccgccgcaattgatcaacttgaacaaattggtgagcagttaaatgttcctgtt
tatagtgaacacgatgaaaaaaatgttgccaaaatagttgaaaacggcttaaagcaggct
gatgacaataaaaatgattatgtaattatcgatactgctggtcgactagaaattgatgaa
ccattaatggaagagcttgagcaagttaaaaaggttgctcaaccagacaacattttgctt
gtcgtcgatgccatgacaggtcaagccgctacggatgtggctaaaggttttgatagtcga
ctagatattactggggtaattttaactaaacttgatggtgatacccgtggtggtgcagct
ttatcaattcgagctgtcactggtaagccaattatttatactggtcaaggtgaaaagtta
agtgatctggaacaattccaccctgaccggatggcttcaagaattttaggcatgggagac
atgctgaccttaattgaaaaggcgcagcaagattacgatgccaaaaaggctgaagaagtt
gcagagaaaatgaaggagaataccttcgattttaatgacttcgtagaccagcttgaacaa
gttgaaaagatgggtccgcttgatcagttaattaaaatgattccaggcatggccaataac
ccgcaattgaagaacatgaattttgataagaaacagattgtttacgtcaaagcaatcatt
tcttcaatgacagaagcagaacgggaaaatcccgaattgcttaacccaagtcggcgccgg
cgaattgctgcaggttctggacgaccaatcgttgaagttaaccgaatgattaagcaattc
aaacaagcccgtgatatgatgagcaagattacaaagggtaatctaaagggcatgggcaat
cttcctggaatggattcaccaatgggcaagattgcaatgcgccgcatgggtaaaaagttt
aagaagaacaagaagaagagaatgaaagtcaagcgttatcattcttaa
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