Lactobacillus panisapium: GYM71_07475
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Entry
GYM71_07475 CDS
T07602
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
lpai
Lactobacillus panisapium
Brite
KEGG Orthology (KO) [BR:
lpai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpai03400
]
GYM71_07475 (radA)
DNA repair and recombination proteins [BR:
lpai03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
GYM71_07475 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
DnaB_C
ChlI
AAA
AAA_22
SLFN-g3_helicase
Lon_C
AAA_16
AAA_24
AAA_14
nSTAND3
DUF7125
GvpD_P-loop
ABC_tran
DUF7129
NTPase_1
divDNAB
ATPase_2
NACHT
AAA_5
RUBY_RBDX
NB-ARC
NPHP3_N
AAA_19
MCM
RNA_helicase
KTI12
RuvB_N
CbiA
HypA
Motif
Other DBs
NCBI-ProteinID:
QYN53262
LinkDB
All DBs
Position
complement(1556163..1557539)
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AA seq
458 aa
AA seq
DB search
MAKIKTKYKCHSCGYISASYLGRCPNCGAWNQFEKETETVQARSTKGSPSRLIKKTGINE
PVKITAVKAEKEERIKTSMDELNRVLGGGIVPGSLVLIGGDPGIGKSTLMLQIMSELSAT
YRVLYVSGEESANQIKLRADRLGLSGNEMMLYPETDMEDIRQQIDTLKPDFVVIDSIQTM
NEPSLDSMTGSASQVREVTSELMKIAKMDAITVFVIGHVTKEGAIAGPKILEHMVDTVLY
FEGDEHHAYRILHSVKNRFGAANEIGMFEMVNKGLQEVTNPSAIFLDERLPNSTGSAIVV
SLEGTRPILAEIQALVTPTAFGYAKRTTSGIDFNRAGLLLAVLEKRGNLMLQNQDVYLTA
TGGIRLNEPAVDLAVVMAIASSYKNEEILPTDCFVGEVGLTGEVRRVNQIDARIKEAAKT
GFKRIFIPKHNMRASLQNLGIEVIPVASIPQALKLVLG
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagattaaaactaagtacaaatgtcattcctgtggttatatttctgccagttat
ttgggccgctgtcctaattgcggtgcttggaatcagtttgaaaaagagactgaaacagtc
caagctcgttccactaagggcagtccgagccggttaattaagaaaactgggattaatgaa
ccagttaagattaccgctgttaaggctgaaaaagaagagcggatcaaaacgagcatggat
gaattaaaccgtgttttaggtggtggaatagtaccaggctcattggtcttaatcggtgga
gatcccggaatcgggaaatcaactttaatgttacaaatcatgagtgaattgtccgcaacc
taccgggttttatacgtatccggtgaggaatctgctaatcagatcaaattgcgcgcagac
cggttgggtcttagtggtaatgagatgatgctttatccagaaactgatatggaggatatt
aggcaacagattgacacccttaaacccgattttgtcgtaatcgactcgattcaaacgatg
aacgagcctagtcttgattcaatgaccggttcggcctcgcaggtacgtgaagtgaccagt
gaattaatgaaaatcgcgaaaatggatgcgattacggtttttgtgatcgggcacgttact
aaagaaggtgccattgcgggtcccaagattcttgagcacatggttgacacggttctgtat
tttgaaggcgatgagcatcatgcgtaccgaattctccattcggttaaaaatcgttttggt
gctgccaatgaaatcgggatgtttgaaatggtcaataaggggctgcaagaagtaaccaac
ccgtcagcaatctttcttgatgagcgcttgccaaattcaaccggttcggccattgtcgta
tcactagaaggtactcgcccaatattagctgaaattcaggcactggttacaccaacagcc
tttggctatgcgaaaagaacaacttctggaattgactttaaccgcgcgggcttattatta
gcggtgctagaaaaaaggggcaatttaatgctccaaaaccaggatgtctacttaacagct
actggtggtattcggttaaatgaaccggctgtcgacttagcagtagtaatggcaattgct
tccagctataaaaatgaagaaattttaccgacagattgttttgttggtgaagttggttta
accggtgaggtgcgtcgggtcaatcaaatcgatgcccgcattaaagaagctgctaaaaca
ggttttaagcgcatttttattcctaaacacaacatgcgggctagtctgcagaaccttggc
attgaagtgataccagtggctagcatcccgcaggcattgaaattggttttaggataa
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