Lysinibacillus pakistanensis: GDS87_02575
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Entry
GDS87_02575 CDS
T06280
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
lpak
Lysinibacillus pakistanensis
Pathway
lpak03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lpak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GDS87_02575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpak03400
]
GDS87_02575
Enzymes [BR:
lpak01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
GDS87_02575
DNA repair and recombination proteins [BR:
lpak03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GDS87_02575
Prokaryotic type
GDS87_02575
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QGG49886
UniProt:
A0ABX6D5E7
LinkDB
All DBs
Position
563036..563713
Genome browser
AA seq
225 aa
AA seq
DB search
MKQVFPNDWQAILAEEMEKTYYKKLRQFVAHEYSTQTIYPPMNDVMNAFTTTAYCDVKVV
ILGQDPYHGPNQAHGLSFSVKPGVPHPPSLRNMLQELQDDVGCPIPQHGTLTKWAQQGVM
LLNTVLTVRAGQANSHKEKGWEQFTDTVIDKLAARNEAIIFVLWGKPAQRKKPLIRKYST
PHVILEAPHPSPLSAYRGFFGSKPYSKINAQLLEWGEQPIDWCLG
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaagtattcccgaatgattggcaagcaatactagcagaagaaatggaaaaaaca
tactataaaaagttacgacaatttgtagcacatgaatattcaacacaaacaatttatcca
cctatgaatgatgtcatgaatgcctttactacaacagcttattgtgatgtgaaggtcgtc
atattaggtcaagatccctatcatggtccgaatcaagcacatgggttgagtttctcagta
aagccaggagttccacatccaccaagtctacgtaatatgctacaagaattacaggatgat
gtgggttgtccgattccccaacatggcacattaacgaaatgggctcagcagggtgtcatg
ctattgaacacagttttaactgtgcgtgcaggtcaagcaaactctcataaagaaaaaggg
tgggagcaatttactgatactgtaatcgataaattggcagcaagaaatgaggctattatt
tttgtattatggggcaagccagcacaacggaaaaaaccattaatccgtaaatattcaaca
ccacatgtcattttagaggcacctcatccaagtccacttagtgcctatagaggctttttt
ggtagtaaaccctattctaaaattaatgcacagttactagaatggggagagcagcctatt
gattggtgtctaggataa
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