Lysinibacillus pakistanensis: GDS87_02660
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Entry
GDS87_02660 CDS
T06280
Name
(GenBank) PBP1A family penicillin-binding protein
KO
K21464
penicillin-binding protein 2D [EC:
2.4.99.28
3.4.16.4
]
Organism
lpak
Lysinibacillus pakistanensis
Pathway
lpak00550
Peptidoglycan biosynthesis
lpak01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lpak00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GDS87_02660
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lpak01003
]
GDS87_02660
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lpak01011
]
GDS87_02660
Enzymes [BR:
lpak01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
GDS87_02660
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
GDS87_02660
Glycosyltransferases [BR:
lpak01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
GDS87_02660
Peptidoglycan biosynthesis and degradation proteins [BR:
lpak01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
GDS87_02660
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transgly
Transpeptidase
PBP_1A_C
GlpR
DUF7248
Motif
Other DBs
NCBI-ProteinID:
QGG49903
UniProt:
A0AAX3WWK1
LinkDB
All DBs
Position
complement(580986..583040)
Genome browser
AA seq
684 aa
AA seq
DB search
MKRKSYQRKQKRAKRTRKTLTLFIAFTSAIVVAFIALRVYVQVAGAPPLTVPKASIFLDE
NENQIGDHFTNERRYWVSLDEMSPYLKTAVVSVEDKDFYKHSGFDFSRIAGAVLIDLKAG
SKVQGASTITQQYARNLYLSHEKSWTRKLNEALYAYRLEVFYDKDEILEGYLNTVYYGHG
MYGVEAASRFYFGKSASDLTLAEAAMLTGVPKGPSIYSPIANLEKATNRQHVILKLMADQ
GAITQDEKTRAESEQLVLKNDSWVATKSVAPYFLDVAWQEASDILKSKNLDISEGGWTIQ
TTLDPGHQKAAEEAVAKNLPANDLQASFVSMESKTGAVTALVGGRDYAASSFNRVTQAKR
QPGSTIKPILYAAALENGYNPLTFLDVGETTFTYDNGRGTYSPKNVNGEFATHDMSMAQA
IAISDNIYAVKTLEEIGFKPFHDMAKRFNVNIGAKDNLSIALGTAETTLYEMTNAYNILA
SQGQKTLPTTIVSIKNAHGDVIYENKEVNAKSETVLSKENTYILTEMMTGIFDPVFSDYS
PATGISIRSRMTHTYAAKSGSTNSDQWLIGFTPSLTAGVWNGYDQGKNLTTKEDTAATKK
IWIDFMENVNKGTKNEDFVKPKNVKGVVVDIETGKLATDACPKQRLVYLDAKDVPTEKCT
NFDILDTNTWGEFWNMLPFSIFKN
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaaaaagctatcaacgtaaacaaaaacgtgcgaagcgtacacgtaaaacattg
accctttttatcgcctttacatctgcaattgtagtagcattcatagctctacgcgtttat
gtacaagtagctggagctccccctttaaccgtaccaaaggcctctattttcttagatgaa
aatgagaaccaaattggggatcactttacgaatgaacgacgctattgggttagtcttgat
gaaatgtcaccgtacttaaaaacagcagtcgtttctgttgaggataaagatttctataag
catagcggttttgatttttcccgaatcgctggtgcagtgttaatcgatcttaaagctggc
agtaaggttcaaggagctagtacaattacacaacaatatgctcgcaatctatatctttca
catgaaaagtcttggacgcgaaaattaaacgaggcactgtatgcttatagattagaagtt
ttttatgataaggatgaaatattggagggctacttaaatactgtctattacggacacggt
atgtacggcgtagaagcagctagtcgcttttattttggtaaatctgcaagtgatttaaca
ttagcagaggcagcaatgttaacgggagtacctaaagggccaagcatctattctcctatt
gctaatttagaaaaagcaacaaatcgccagcatgttattttaaaactaatggcagatcaa
ggcgctattacacaagatgaaaaaacacgtgcagaaagtgaacagcttgttttaaaaaat
gatagctgggtagcaacaaaatctgttgcaccatattttcttgatgtagcatggcaagag
gctagcgatattctgaagtccaaaaatcttgatattagcgaaggtggctggacgattcaa
acaactttggatcctggacaccaaaaggccgcagaggaagctgtagctaagaatctgcca
gcaaatgatctgcaagcctcatttgtcagcatggaatccaaaactggagctgttacagca
ctagttggaggtcgtgattatgcagctagctcatttaatagggttacacaggcaaaacgt
cagccaggttcaactattaaacctattttatatgcagctgctttagagaatggctataat
ccattaacatttttggatgtaggtgaaacaacctttacttatgataatggacgaggaacc
tattctcctaaaaatgtaaatggtgagtttgcaactcatgatatgtcgatggcacaggct
atcgcaatctctgataatatctatgccgtgaaaacattagaggaaataggatttaaacca
tttcacgatatggctaaacgcttcaacgtcaacattggtgcaaaggacaacttatcgatt
gcactcggaacggcggaaaccactttatatgaaatgacaaatgcctataatattctggca
tcgcagggacaaaaaacattaccaactactattgtttcaattaaaaatgctcatggtgac
gtcatctatgaaaataaagaggtaaatgctaagtctgaaacagtgctctcaaaagaaaat
acgtatattttaacagaaatgatgacaggtatattcgatcctgtctttagcgactactct
cctgctactggaataagtattcgctctcgtatgacacatacgtatgctgcaaaatcaggc
tctacaaatagcgatcaatggctcattggatttacacctagcttaactgctggtgtctgg
aatggctatgatcaaggcaaaaacctaacaacaaaagaagatactgctgctacaaagaaa
atatggattgattttatggagaatgttaataaaggcacaaagaacgaagatttcgtaaaa
cctaaaaatgtgaaaggtgtagtagtcgatattgaaactggtaagcttgctactgatgca
tgtcctaaacaacggctcgtatatttagatgcaaaggatgtacctaccgaaaaatgcaca
aatttcgatattctcgatactaatacatggggagaattctggaatatgctcccgttctcc
atttttaaaaattag
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