Lysinibacillus pakistanensis: GDS87_02905
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Entry
GDS87_02905 CDS
T06280
Name
(GenBank) aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
lpak
Lysinibacillus pakistanensis
Pathway
lpak00260
Glycine, serine and threonine metabolism
lpak00460
Cyanoamino acid metabolism
lpak00630
Glyoxylate and dicarboxylate metabolism
lpak00670
One carbon pool by folate
lpak00680
Methane metabolism
lpak01100
Metabolic pathways
lpak01110
Biosynthesis of secondary metabolites
lpak01120
Microbial metabolism in diverse environments
lpak01200
Carbon metabolism
lpak01230
Biosynthesis of amino acids
lpak01240
Biosynthesis of cofactors
lpak04981
Folate transport and metabolism
Module
lpak_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
lpak00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
GDS87_02905
09102 Energy metabolism
00680 Methane metabolism
GDS87_02905
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
GDS87_02905
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
GDS87_02905
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
GDS87_02905
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
GDS87_02905
Enzymes [BR:
lpak01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
GDS87_02905
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
SelA
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
QGG49951
LinkDB
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Position
637663..638904
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AA seq
413 aa
AA seq
DB search
MAYEKLAVQDKAVLEGILAEKKRQQANIELIASENFVSEAVMEAQGSVLTNKYAEGYPGK
RYYGGCEHVDVVEDIARDRVKEIFGAEYANVQPHSGAQANMAVYHTILEPGDTVLGMNLS
HGGHLTHGSPVNFSGILYNFVEYGVTKDTQVIDYEDVRQKALEHKPKLIVAGASAYPREI
DFSKFREIANEVGAYFMVDMAHIAGLVAAGEHQSPVPYADFVTSTTHKTLRGPRGGLILA
SKEWEQKLNKSVFPGIQGGPLMHVIAAKAVAFGEALQPEFKEYAKQIKANAKVLGEVLVA
EGVEIVSGGTDNHLLLLNVKSLGLTGKVAEHALDEVGITTNKNTIPYDTESPFVTSGIRI
GTPAVTSRGFKEEDMKEVGAIIAAVLKNPEDEAVKAEAKARVKALTDKHPLYA
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggcatacgaaaaattagcagtacaagacaaagcagttttagaggggatccttgcagaa
aaaaaacgtcaacaagcaaatattgagttaatcgcatcagagaactttgtttctgaagct
gtaatggaagcacagggctctgttctaacaaataaatatgctgagggttatccaggtaaa
cgttattatggtggctgtgaacatgtagacgtggtagaggatattgcacgtgaccgtgta
aaagaaatctttggtgcagaatatgcaaacgtgcaaccgcattctggtgcacaagctaac
atggcagtttaccacacaattttagagccaggtgatacagttcttggtatgaacctttct
catggcggtcacttaacgcatggatctccagtaaacttctcaggcattctctataatttc
gtagaatatggtgtaacaaaagatactcaagtaattgattatgaagatgtacgtcaaaaa
gctttagaacataaaccaaaattgattgttgcaggtgcatcagcttacccacgtgaaatc
gatttttctaagttccgtgaaatcgcaaacgaggtaggagcatactttatggttgatatg
gcacatatcgctggcctagtagctgctggagaacatcaatcaccagtgccatatgctgat
tttgtgacatctacaacacataaaacattacgtggtccgcgtggtggtttaatccttgct
tcgaaagaatgggagcagaagctaaacaaatctgtattcccaggtattcaaggcggtcct
ttaatgcacgttatcgctgcaaaagcagtagcattcggcgaagcattacagccagagttt
aaagaatacgcaaaacaaattaaagcgaatgccaaagtattaggtgaagtattagtggct
gagggcgttgaaattgtatctggtggtacagataaccatctattgcttcttaatgtgaag
tctcttggcttaacaggtaaagtagcagagcatgcactagacgaagtagggattacaaca
aataaaaatacaatcccttatgatacagaatctccatttgttacttcaggtatccgtatt
ggtacacctgcagttacatcacgtggtttcaaagaggaagatatgaaagaagtcggtgca
attattgcagcagttctaaaaaatccagaggatgaagctgtgaaagcagaggcaaaagct
cgcgttaaagctctaacagacaaacatcctttatacgcataa
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