Lysinibacillus pakistanensis: GDS87_03250
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Entry
GDS87_03250 CDS
T06280
Name
(GenBank) SH3 domain-containing protein
KO
K01448
N-acetylmuramoyl-L-alanine amidase [EC:
3.5.1.28
]
Organism
lpak
Lysinibacillus pakistanensis
Pathway
lpak01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
lpak00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
GDS87_03250
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lpak01011
]
GDS87_03250
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lpak03036
]
GDS87_03250
Enzymes [BR:
lpak01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.28 N-acetylmuramoyl-L-alanine amidase
GDS87_03250
Peptidoglycan biosynthesis and degradation proteins [BR:
lpak01011
]
Peptidoglycan biosynthesis and degradation
Amidase
GDS87_03250
Chromosome and associated proteins [BR:
lpak03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
GDS87_03250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amidase_3
SH3_3
SLH
SH3_4
SH3_2
Motif
Other DBs
NCBI-ProteinID:
QGG53822
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All DBs
Position
724212..726059
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AA seq
615 aa
AA seq
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MFTIHSAQASGGFVDVPKDHEAYEEINYLVSLGVIKGYTENGKTYYKPYNSVTRGQVAKM
AVVASGNKPLVISKSNFSDVTVGTELSGYVERAVQLGFFRTNTKGQFLPNKPLTRDEMSY
VLTKAFKLDTSEYENIDSPFVDVGITHAYVQYVNTIYYNGITKGSGQNYNPNSSVTRAQF
ALFVARAKSEKYRLEPPVKGVAVPDTSQVIGLIASTTDGLNIRKSKDSSSSTNIVGTVNK
GGKLSVYAVEGDWLKITYKGAFAYVYKTYAQFLDADGNALGNVQKQVTTTQGINLYVKPS
SSSKIISSVKSDVKLPVYKTTGGYYLTVVNGLPGYIVANSTVDVEVEQPTTPDPDPTPPI
VTGDLLGRVTVDNLNIRKEANSTSTVLGKLTKGEYVQVNSINGYWAQVTYEGQKGYVHKS
YLKLLNQNGNALKNRIIILDPGHGGKDPGTVVGSNSEKAITLKVSTLVKQKLEAAGAKVL
MTRTSDTYPSLQDRVDFTNENYGEIFVSIHVNSAANTSAQGTETYYAITTGDMHQEDIDL
ASFVNNQIVNNLKMKNRGVKEEQYYVIRNTIIPAILVELGFLTNSEDRGKMTDDQYVELF
ADSIYKGISQYYAKQ
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgtttactatacatagcgcacaagcaagtggcggttttgtagatgttccgaaagatcat
gaagcttatgaagagatcaattatttagttagtttaggagttattaaaggatatacggaa
aatggcaaaacgtattacaaaccttataactcagtaacacgtggacaagttgccaaaatg
gctgttgttgcttcaggtaataagccattagttatcagtaaatcaaacttttcagatgta
acagttggaacagagctttctggctatgtagaacgtgctgtacaacttggtttctttaga
accaatacaaagggacaattcttaccgaacaagcctttaactcgtgatgaaatgagttat
gtcctaacgaaagcgtttaagctggatacgagtgaatatgaaaatattgattctccattt
gtggatgtagggattacacatgcctacgttcaatatgtgaatacaatttactataatggt
attacaaaggggagcggtcaaaattataacccaaatagttcagtgacacgtgcacagttt
gcgttatttgtcgcacgcgcaaaaagtgaaaaatatcgcttagaaccccctgtaaaaggt
gtagcagttcctgatacatcacaagttatcggattgattgctagtacaactgatggttta
aatattcgtaaatcaaaggattcctcatcttctactaatattgtaggcacagtgaataaa
ggaggtaaactatcagtctatgcagtagagggagactggttaaagattacctataaaggc
gcctttgcctatgtttataaaacgtacgcacaatttttagatgctgatggaaatgcacta
gggaatgtccaaaaacaggtcacaacaacgcaaggtatcaatctttatgttaagccatca
tcttcctcaaaaatcatttcctcagtgaagagtgatgtgaaattaccagtttataagact
acaggtggctattatttaactgtagtaaacggtttaccaggttatattgttgctaatagc
acagtcgatgttgaagttgagcagcctactacgccagatccagacccaactcctccaata
gtgacaggtgatttacttggtcgtgtgacagtagataatttaaacatccgcaaagaagcg
aattctacttctacagtgctaggcaaacttactaaaggtgagtatgtccaagtgaacagc
attaatggttattgggcacaggttacgtatgaaggtcaaaaagggtatgtccataaatca
tacttaaagcttttaaatcaaaatggcaatgcattaaaaaatcgtattatcattcttgat
ccaggtcatggtggtaaggacccaggaactgtagtaggttctaactcagagaaagctatt
acattaaaggtcagcacacttgtgaagcaaaagcttgaagcggcaggtgcaaaagtattg
atgactcgtacaagtgacacctatccatctctacaagaccgagtagattttacaaatgaa
aactatggtgaaatctttgtaagtattcatgtaaactcagcagcgaatacttctgcacaa
ggcactgaaacatattatgctattacaacaggtgatatgcatcaggaagatattgatcta
gcatcatttgttaataatcaaattgttaataacttaaaaatgaaaaatcgtggtgttaaa
gaagaacaatactacgttattcgcaatacgattataccagctattctagttgaactaggc
ttcctaacaaatagtgaagatcgcgggaaaatgacagatgatcaatatgtcgagctattt
gctgactcaatctacaaaggaatttcccaatattacgcaaaacaataa
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