Lysinibacillus pakistanensis: GDS87_04790
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Entry
GDS87_04790 CDS
T06280
Name
(GenBank) stage V sporulation protein D
KO
K08384
stage V sporulation protein D (sporulation-specific penicillin-binding protein)
Organism
lpak
Lysinibacillus pakistanensis
Pathway
lpak00550
Peptidoglycan biosynthesis
lpak01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lpak00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GDS87_04790
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lpak01011
]
GDS87_04790
Peptidoglycan biosynthesis and degradation proteins [BR:
lpak01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
GDS87_04790
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
ANT
PASTA
Motif
Other DBs
NCBI-ProteinID:
QGG50300
LinkDB
All DBs
Position
1066996..1068912
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AA seq
638 aa
AA seq
DB search
MKWISIHSKKRLRILYVLFMGVAVAIVIRLFFLQVLDQKELTKKAEENWDREIPFANERG
HITDRDGQSIVTNKLAPTLYFMPSQSKDIEGAAAKIAQVLDVDEQKLLEKMKKKEYLVKL
APEGKNIPYEKAVQLQGMQIEGLYSGVDYARDYPYGTMLSRFLGFTGYDAQGLAGIEYEY
DKLLQANSSAIRLFTDAKGNNLPNVASAWKPGEDGATIELSIDVDVQQVVERELSQAMER
YEADQALAIAMNPNNGEILALASYPTFHPAQYQIVEPAIYNRNLPVWMTYEPGSTFKIIT
LSAALEENLVDLEHDTFYDPGYTMVAGARLRCWNRGGHGHETFLEVVENSCNPGFIELGQ
RLGSERLLQYIKDFGFGQKTGSNIAGEASGILFSKEAFGPVEQATTSFGQGVAVTPIQQV
QAVAAAINGGKLYTPYVVKKIFNPNTGEVIKETEPEVKKQVIREETSAKVRGALESVVAK
GSGRQAYRDGLRIGGKTGTAQKVENGRYKSGEYIVSFIGFAPADNPQIVVYVAVDNPKKT
TQFGGVVAAPIVGQIIEDVAPFVGIEKSKEQLEKDYRWGDPITVKVPSFIGQTKDDIAKQ
HYPFRIEWHGEGTKIGNQLPEVDSVIKQDGTIHLYLEN
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgaagtggatttctatccattctaaaaaacgtttacgtattttatatgtattatttatg
ggtgttgcagtagccattgtcattagattgttcttcttacaggtactagatcaaaaagag
ctgacaaagaaggcagaagagaattgggacagagaaattccttttgcaaatgaacgcggt
catataacagatcgtgatgggcaaagtattgtcacaaataagcttgcccccactctttat
ttcatgccttctcaaagcaaagatattgaaggcgctgctgcgaagatagcacaggtgctc
gatgttgatgaacaaaagctattggagaaaatgaagaagaaagaatatttagtgaagttg
gcaccggaaggaaaaaatattccctatgaaaaagcggtgcagctacaagggatgcaaatc
gaaggcttatatagtggggtcgattatgcaagggattacccatacggcacaatgctctca
cgatttttaggttttacaggctatgatgcccaagggttagcaggcattgaatatgaatat
gataaactactccaagctaattcctctgccattcgcctttttacagacgccaagggcaat
aacttaccaaatgttgcaagtgcttggaagccgggagaagatggagcaacgattgagctt
tcaattgatgtagatgtgcaacaggtcgtggagcgtgaattatctcaggctatggagcgt
tatgaggctgaccaagcgttagctattgcaatgaatcccaacaatggcgagattttagca
ttagcctcctatccaaccttccatcctgcacaatatcaaattgttgaacccgctatctat
aatcggaatttacctgtatggatgacctatgagcctggatcaacgttcaaaattattacc
ttgagtgcagcactagaagagaatttagtggatttagaacatgatacgttctatgaccca
ggctatacaatggttgctggcgctagattgcgttgctggaatcgtggtgggcatggtcat
gaaacattccttgaagttgtagagaattcatgtaacccgggattcatagaattaggacaa
agacttggcagtgaaagattactacaatatattaaggattttggttttggtcaaaagaca
gggtctaacattgcaggtgaagcctcgggaatattattttctaaagaagcctttggacca
gtggagcaggctacaacttctttcggtcaaggggtggcggttacgcctattcaacaagta
caggcagttgccgcagctataaatggaggcaagctttatacgccatatgttgtgaagaag
atttttaatccaaatactggggaagttattaaggagactgaaccagaagttaaaaaacag
gttattcgtgaggagacatctgccaaggttcgaggtgcattagaatcagttgtagcaaag
ggctctggacgacaggcataccgagatggcttacgtattggggggaaaacgggaacagca
cagaaagtagagaatgggcgttataaaagcggtgaatatatcgtatcttttataggcttc
gctccagcggataatccacagattgttgtgtatgtagcggtggataacccaaagaaaaca
actcaatttggtggtgttgttgcagctccgattgttggtcagattattgaagatgttgca
ccttttgttggcattgaaaaatcgaaggaacagcttgaaaaggattatcgttggggtgat
ccaatcactgtgaaggtaccaagctttattggtcaaacgaaggatgatattgcgaagcag
cattatccattccgtattgaatggcatggtgaaggaactaaaattggtaatcaactgcct
gaagtggatagtgttatcaaacaagatggcacaattcatttgtatttggagaactaa
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