Lysinibacillus pakistanensis: GDS87_05480
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Entry
GDS87_05480 CDS
T06280
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
lpak
Lysinibacillus pakistanensis
Pathway
lpak02020
Two-component system
lpak02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
lpak00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GDS87_05480
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
GDS87_05480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lpak03021
]
GDS87_05480
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
lpak02035
]
GDS87_05480
Transcription machinery [BR:
lpak03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GDS87_05480
Bacterial motility proteins [BR:
lpak02035
]
Flagellar system
Flagellar assembly proteins
Stator
GDS87_05480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
DnaD_N
UPF0122
DUF1492
Nop25
Motif
Other DBs
NCBI-ProteinID:
QGG50426
UniProt:
A0AAX3WZK5
LinkDB
All DBs
Position
1212870..1213640
Genome browser
AA seq
256 aa
AA seq
DB search
MTQPNLNDEQKLWNRWIDDRDPDAGDLLIKKYISLVSYHVQRIGASLPKNVSRDDLTSLG
MVGLFDALNKFDIKRDLKFDTYASFRVRGAIIDGLRKEDWLPRSAREKAKKLDAQIERLE
QKYMRHVTPEELAENLELPVEEVYQTVQEHFFSNVLSINEQQDQEETDGKSFVIRDDTTK
TPEQVIIKSELLGDLAENIQKLNEKEQLVLSLFYTEELTLTEIGEMLDLSTSRISQIHSK
ALLKLRKLLSSEMINA
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgacacaaccaaatctaaacgatgaacaaaagctgtggaaccgttggatagatgaccgt
gatccagatgctggggatttgcttatcaaaaaatatatttcactagtatcttatcatgta
caacgaattggtgcgagcttaccgaaaaatgtatctcgagatgatctaactagcttaggc
atggtaggtctatttgatgcattaaataaatttgatattaagagagatttgaaatttgat
acatacgcttcttttagagtaagaggagcaattatagatggtttacggaaagaagattgg
ttgcctcgttctgctcgtgaaaaagctaaaaaattagatgcgcaaattgaacggttagaa
caaaaatatatgcgtcatgtaactcctgaggagcttgctgaaaatttggaattaccagta
gaggaagtctatcaaactgtacaggagcatttcttttcgaatgtcctttctattaacgaa
caacaagatcaggaagaaacggatggaaagtcatttgttattagggatgatacaacaaaa
acacctgaacaggttatcattaaatcggaattattgggtgatttagcggaaaatattcaa
aagttgaatgaaaaggaacaattggtgcttagtttattttatacagaggaattgacctta
acagaaatcggagaaatgcttgatttatcaacttcacgtatttcacaaattcactcaaag
gcgcttttaaagctacgaaagttattatctagtgaaatgattaatgcctaa
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