KEGG   Lysinibacillus pakistanensis: GDS87_05580
Entry
GDS87_05580       CDS       T06280                                 
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
lpak  Lysinibacillus pakistanensis
Brite
KEGG Orthology (KO) [BR:lpak00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:lpak03016]
    GDS87_05580 (truB)
Enzymes [BR:lpak01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     GDS87_05580 (truB)
Transfer RNA biogenesis [BR:lpak03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    GDS87_05580 (truB)
 Prokaryotic type
    GDS87_05580 (truB)
SSDB
Motif
Pfam: TruB_N TruB_C_2
Other DBs
NCBI-ProteinID: QGG50446
UniProt: A0ABX6D7H3
LinkDB
Position
1235003..1235914
AA seq 303 aa
MNGILPLWKERGMTSHDCVFKLRKILRTKKVGHTGTLDPGVEGVLPICIGQATRIAEYLT
DAGKTYEAIISIGRTTTTEDAEGETVEQDTNIKQFTRGQLLEVLASLTGVIEQTPPMFSA
VKVNGKRLYEYARKGETVERPTRQVTIYALELLDEIELYEGQEITFPVRIACSKGTYIRT
LAVQIGEALGYPAHMQELVRTASGTFTQENCFTLGQVAELMEAEQIDRCILPVEYALTDF
PYIEITAANEKEIFNGQVLPADTLLKIHDKIVFGINGKAMAVYQPHPTKEGLMKPHKMFP
TIE
NT seq 912 nt   +upstreamnt  +downstreamnt
atgaacggtattttaccgctttggaaggaacgtggcatgacaagccatgattgtgttttt
aaattacgaaaaattttacgcacaaaaaaagtaggacatacaggtactcttgatccaggg
gtagagggtgttctaccaatttgtattggacaggcaacaaggattgcagagtatttaaca
gatgcaggaaaaacctatgaagctattatttctattggtcgaacaacgacaactgaggat
gcagaaggtgaaacagttgaacaggataccaacatcaagcaattcactcgaggtcaatta
ttagaggtgctagcttctttaacaggagtgattgaacaaacaccacctatgttttctgcg
gtcaaagtcaatggtaaacggctttatgaatatgcacgtaaaggggaaaccgttgaaaga
ccgacacgtcaggttacaatttatgctttagagcttttagatgagatcgaactatatgaa
ggacaagaaattacgtttccagttcgcatagcttgtagtaagggcacatatatccgcaca
ttagccgtacaaataggggaagcacttggttatcctgcacatatgcaagagcttgtacgc
acagcctcaggcacatttacacaagaaaattgctttacattgggacaggtagctgagctg
atggaagctgaacaaattgatagatgtattttaccagttgagtatgcattaacagacttt
ccatatattgaaattactgctgctaatgaaaaagaaattttcaatggacaagtgcttcca
gcagatacattattaaagatacatgataaaattgtttttggaatcaatgggaaagcaatg
gcggtttatcaaccacatccaacgaaggaagggttgatgaaaccacataaaatgtttccg
acgatagagtag

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