Lysinibacillus pakistanensis: GDS87_06490
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Entry
GDS87_06490 CDS
T06280
Name
(GenBank) transcriptional regulator
Organism
lpak
Lysinibacillus pakistanensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_50
PAS_9
HTH_8
AAA_5
AAA_2
NUMOD1
PAS_4
PoNi_N
PAS
DSBA
HTH_1
HTH_28
HTH_38
HTH_29
HTH_Tnp_1
Motif
Other DBs
NCBI-ProteinID:
QGG50621
LinkDB
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Position
1421378..1423024
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AA seq
548 aa
AA seq
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MSITELHKDEHFFLVKNDEVIVKSDIQIELLEKIIKKYSKGTETYEVEGYFIHVLETSQG
SLFNIRPLMQFSHFDFMNPLSNKVLNSISDGITICDSDGKILFQNDIDIEIVGINLMGRY
AKDAIAEGLMSDSISMKVIESKEKVTILQTFINGKCFLVTGKPIFDEKGELQYVVAITRD
MTQLKLLETEVKKLEVQNENFKNKLQALHNKEATTSSLIAVSPAMMDVVNRVMRIAEVDS
TVLIGGESGVGKEEITKLIHVNSRRSHKQILTINCSAIPENLLETELFGYEGGAFTGASR
GGKAGLFEIASGGTVFLDEIGEMPLLLQAKLLRVLQESEVQRIGSGRPISIDVRIIAATN
RNLAEMVRQGSFREDLYYRLNIIPIEIPPLRQRRQDIIPLVHHFLAVIGEKYGIHRTIES
SAMKILVSYDWPGNIRQLKNMVERICLLATQPEITVYTVQQELDCNTTNIRDIENAEQLP
KLQESAVTTMFSGTLKEQVAAFEKQIIKQALSKYPSIRQAAKSLGCDQSTLVRKIQKFQL
TRHISYKE
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgtcgataacagaacttcataaagatgaacatttttttcttgtcaaaaatgatgaagta
attgtaaaaagtgatatccaaatagagctccttgaaaaaattataaaaaagtatagtaaa
gggacagaaacatatgaggtagaaggctattttattcatgtattagagacttcacagggt
agtttatttaatattagaccattaatgcagtttagccattttgattttatgaatccttta
tcaaacaaagtattaaattccatatcagatggcattaccatatgtgatagcgatgggaaa
atattatttcaaaatgatattgatatcgaaattgtcggtattaatttaatggggagatat
gcaaaagacgctatagctgaaggattaatgagtgattctatatccatgaaagtcatcgaa
tcgaaagaaaaagtaactatactgcaaacgttcattaatggaaaatgctttttagtgacg
ggcaagccaatatttgatgaaaagggtgagttgcaatacgtagtagccattacacgtgat
atgacccagttaaaattactagagacagaagtgaaaaaattagaggttcaaaacgaaaat
tttaaaaataagctacaagcattacataataaagaggcgacaacaagtagtttaatcgct
gtatctcctgcaatgatggatgttgttaatcgcgtgatgaggattgcggaggtagattct
actgtattaattgggggtgaatcgggcgttggtaaagaagaaattacaaagctaattcat
gtaaatagtagacgtagccataagcaaatattaacgattaactgtagtgcaatacctgaa
aatctattagaaaccgagctttttggctatgagggaggagcatttacaggagcgtctaga
ggtggtaaggctgggttatttgaaattgcgtcaggtggtacagtatttttagatgaaata
ggagagatgcctttgctactacaggcaaaattattacgtgtgctccaagagtcagaggtt
caacgtattggtagtgggaggcctatttctattgatgtccgcatcattgcagcaacgaat
cgcaatttggcagaaatggtgagacaaggtagtttccgtgaggatttatattatcgttta
aatatcatccccattgaaataccaccattaagacaacgtcgtcaggatattattccacta
gtccatcattttttagctgtcattggagagaaatacgggattcatcgaactattgagtca
tcggccatgaaaatattagtgtcctatgattggccaggaaatatacgtcagcttaaaaat
atggtggaacgaatttgcttattagctacacagccagaaataacagtatatacggtacaa
caagaattagattgtaatacaacgaatattcgtgatatcgaaaatgcggagcaactacct
aaattacaggaatcagctgttacaaccatgtttagtggcacattaaaggaacaagtagct
gcttttgaaaagcaaattattaagcaggcattgtctaaatatccaagtattaggcaggca
gccaaatcacttggctgtgatcagtcaacattagtacgtaaaattcaaaaatttcaatta
acaaggcatatttcttataaggagtag
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