Lysinibacillus pakistanensis: GDS87_06785
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Entry
GDS87_06785 CDS
T06280
Name
(GenBank) restriction endonuclease
KO
K03573
DNA mismatch repair protein MutH
Organism
lpak
Lysinibacillus pakistanensis
Pathway
lpak03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lpak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
GDS87_06785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpak03400
]
GDS87_06785
DNA repair and recombination proteins [BR:
lpak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Strand discrimination factor
GDS87_06785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutH
GerA
Motif
Other DBs
NCBI-ProteinID:
QGG50675
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Position
1478762..1480114
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AA seq
450 aa
AA seq
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MMYKNEKQLLDKAREAIGKTFNEIDLHDRLGKGQKGGFGHIIEESHFGYEINSNAEPDFN
DLGIELKVTPFRKNKNGTLSAKERLVLNIINYMEEVHTEFETSSFWKKNRKLLLMFYEWK
SEIERKNFKIIETTLYDYPEEDLIIIKKDWEYIVSKIHAGEAHLLSEGDTQYLGACTKGA
NKSSVRQQPCSEIMAPQRAYSLKQSYMTSIVREVITDEKLTYFASANELREKTIDELLHE
RFAPYLGMTQRQMAEQLDVPFNPGNKAFIAKLISSLLGVKGTRLDNIAEFAKANIQFKTI
RLKENGIPKEHMSFVNIDFKEIVKEDWEESYIRNYFLETQLLFVVFQFKEEELIFKGIKL
WHMPMDTIETKLYEYWNAIRSVVNEGVQFQKTKRGLKNNLPDSKFNGVLHVRPKGRNAAD
RTELPDGQWITKQCYWLNDIYISQILKEMG
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgatgtacaaaaatgagaaacaacttttagataaagcccgtgaagcaataggaaaaaca
tttaatgaaattgacctccatgaccgtttaggtaaagggcagaaaggaggatttggtcat
attatagaagaaagtcattttggttatgaaattaatagtaatgctgaaccggattttaat
gatttaggaattgagttgaaagtaacgccatttaggaaaaataaaaatggtacattatca
gcaaaagagcgcctagtattaaacattattaattatatggaagaggtacatacagaattt
gaaacatcgagtttttggaagaaaaatcgtaaattacttttaatgttttatgagtggaaa
tcagaaatagagcgcaaaaatttcaaaatcattgaaactactttatatgattatccagaa
gaagatttaattattattaaaaaggactgggaatatattgttagtaaaattcatgcaggg
gaggctcatttattatctgaaggtgatactcaatatttaggtgcatgtacaaaaggcgca
aataaaagctcagttcgtcagcagccatgttctgaaattatggcaccacaacgtgcatat
tccttaaaacaatcatatatgacatccattgttcgagaagtaattactgatgaaaaacta
acttattttgcatctgcaaatgagcttcgcgaaaaaacgattgatgagctgttacatgaa
cgctttgcaccatatttaggaatgacgcaaagacaaatggcagagcaacttgatgtccca
tttaatcctggtaataaggcatttattgcgaaattgattagttctctgttaggcgtaaag
ggaacacggttagacaatattgccgaatttgcaaaggcaaacattcaatttaaaactatt
cgattaaaagaaaacggtattccaaaagagcacatgtcatttgtgaatatcgatttcaaa
gagatagttaaagaggattgggaagagagctatatccgcaattattttttagaaacacag
ttattatttgttgtatttcaatttaaggaagaagagcttatttttaaagggattaagctt
tggcatatgccaatggacacaattgaaacgaaattatatgagtattggaatgctatccgt
agtgttgttaatgaaggtgtgcaatttcagaaaacaaaacgtggtttaaaaaataactta
cctgactcaaaatttaacggagttctccatgttcgtccaaaaggaagaaatgcagcagat
agaacagagttacctgatgggcaatggattacgaaacaatgttattggttaaatgatatt
tatataagtcagattttaaaagaaatggggtaa
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