Lysinibacillus pakistanensis: GDS87_07960
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Entry
GDS87_07960 CDS
T06280
Name
(GenBank) DEAD/DEAH box helicase
KO
K06877
DEAD/DEAH box helicase domain-containing protein
Organism
lpak
Lysinibacillus pakistanensis
Brite
KEGG Orthology (KO) [BR:
lpak00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
GDS87_07960
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
MZB
Helicase_C
WHD_HRQ1
ResIII
tRNA_int_end_N2
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QGG50897
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Position
1717698..1719968
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AA seq
756 aa
AA seq
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MLSKKRTINELLNEWRYDEELKERIIHWQTLEEQEAKYAPFPRNLHPSLVKALQARGIEQ
LYTHQREAFDLAQSGTSFTAVTPTASGKSYCYHLPVLQTILEDKNARAIYLFPTKALAQD
QKNDLNELIEQSGEEILSYTYDGDTAPGIRQKVRKAGHIVMTNPDMLHSGILPHHTKWVS
LFENLQYIVIDELHTYKGVFGSHVAHVIRRLKRICAFYGSKPVFICTSATIKNPKELAEI
LTNETHALIADSGAPVGKKTFLFYNPPIVHKTFGVRRSAVLEVSDLAKRLYIAGIQTIIF
AKSRVRVEMIVTYLKELTRNKLLDESVRGYRGGYLPSERRVIERGLRDGTIQTVVSTNAL
ELGVDIGQLQACIMTGYPGNIASAWQQAGRAGRRQDEALIIYVAQSSALDQYVVNHPLFL
LGGAPEEARIYPENMLILMDHLKCAAFELPFSTNDAYGEYEVQELLDYLAEEGVVFKTSD
KWHWMSDRFPAHDISLRSASQENVVIIDMTVPAQTKVIGEMDRHSAMTLLHEEAIYLHQG
IQFQVEKLDWEEKKAFVREVDVDYYTDSNLAVEMKVLEEDRSRDYKGGTISFGDVGLVAQ
ATLFKKIRFGTHDNIGSGPIHLPPDEMHTSATWLSLHLSEQWSEAELTEVMIGIAYAMNA
FIPLFIQCDSSDVAVVPQVKASHNKLPTFFVYDKYPGGIGLSEKVYELWEDLLTKTQHHV
INCPCEAGCPSCIGPQDSTMNVKSKVVKLLQLLNYQ
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgttatccaaaaagagaaccatcaatgaattattaaacgagtggagatatgatgaggaa
ttaaaagaacgaattatacactggcagacactggaagaacaggaagcaaaatatgctcct
ttcccgagaaatttacatccttctctagtaaaggcactacaggcaagagggatcgagcag
ctttatacacatcagcgagaagctttcgatttggcgcagagtggtacatcctttactgcg
gttacgccaacagcatcaggtaaatcatattgctatcatctgccagttcttcaaacaata
ttagaggataaaaatgccagggctatttatttatttccgacaaaggctttagcacaggat
cagaaaaatgatttaaatgaattaattgaacaaagtggagaagagatattaagctacaca
tatgatggagataccgcacctggaattcgccaaaaggtacgtaaggcagggcatattgtc
atgacaaaccccgatatgctccattcaggaatattaccacaccatacgaaatgggtatcc
ctttttgaaaatttacagtatatcgttattgatgaattacatacatataaaggtgtattt
ggttcacatgttgcccatgttatacgcagactcaagcggatatgtgcattttatggcagt
aagccggtgtttatttgtacttcggcaactataaaaaatccaaaggaattagcagagatt
ctaacaaatgaaactcatgcattaattgctgattcgggagcaccagttggtaaaaaaaca
tttcttttttacaatcctcctattgttcataaaacgtttggtgtgcgtcgtagtgcggtt
ttagaggtaagtgacctagctaaaagattatatatagcaggtattcaaaccattatcttt
gctaaaagccgtgtgagagtagaaatgatagtgacttatttaaaggagctgacaagaaac
aagctacttgatgaatcggtgcgaggctatcgtggtggctatttgccttctgagcgaaga
gtaattgaacgtggtcttcgagatggtactattcaaacagttgttagtacaaatgcattg
gaattaggagtcgatattggacagcttcaagcatgcattatgacaggttacccaggaaat
attgcaagtgcctggcagcaagctggtcgcgctggtcgtcgacaggacgaggcattaatt
atttatgtagcccaatcgtctgcactggatcagtatgtggtcaatcatccactcttttta
ctcggtggtgctcctgaggaagcacgtatttaccctgaaaatatgttaattttaatggac
cacttaaaatgtgcagcattcgagttacctttttccacaaatgatgcatatggagaatat
gaagttcaggaattattagattatctagcagaggaaggcgttgtttttaaaacaagtgat
aagtggcactggatgagtgatcgttttcctgcacatgatattagtctgcgctctgcttct
caggaaaacgttgtaatcattgatatgacagttcctgcacaaacaaaggtcatcggtgaa
atggatcgtcacagcgcaatgacattattacatgaagaggcaatctatttacatcagggc
attcagtttcaagtagaaaagcttgattgggaagaaaagaaagcctttgtccgtgaagta
gatgtcgattactacacagattctaatctagcagttgaaatgaaagtactagaagaggac
cgtagtagggattataagggaggcacaattagctttggtgatgttgggttagttgctcag
gccacactatttaaaaaaatacgctttggcactcatgataatatcggatcaggtccaatc
catttaccaccagatgagatgcatacaagtgccacctggctatcccttcatttatcagag
cagtggtcagaggcagaattgaccgaggtaatgattggaatagcctacgcaatgaatgcc
tttatacctttgtttattcaatgtgatagcagtgatgtagcagtcgtgccacaagttaaa
gcatcccataataagctgccaacattttttgtttatgataagtatcctggaggaatcgga
ttaagtgaaaaggtctatgaattgtgggaggacttattaacaaaaacacagcaccatgtt
ataaactgtccttgtgaagctggctgcccatcttgtattggtccacaagattctacgatg
aatgtaaaaagtaaagtcgtcaagctacttcaactattaaattatcagtag
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