Lysinibacillus pakistanensis: GDS87_08510
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Entry
GDS87_08510 CDS
T06280
Name
(GenBank) aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
lpak
Lysinibacillus pakistanensis
Pathway
lpak00260
Glycine, serine and threonine metabolism
lpak00460
Cyanoamino acid metabolism
lpak00630
Glyoxylate and dicarboxylate metabolism
lpak00670
One carbon pool by folate
lpak00680
Methane metabolism
lpak01100
Metabolic pathways
lpak01110
Biosynthesis of secondary metabolites
lpak01120
Microbial metabolism in diverse environments
lpak01200
Carbon metabolism
lpak01230
Biosynthesis of amino acids
lpak01240
Biosynthesis of cofactors
lpak04981
Folate transport and metabolism
Module
lpak_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
lpak00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
GDS87_08510
09102 Energy metabolism
00680 Methane metabolism
GDS87_08510
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
GDS87_08510
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
GDS87_08510
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
GDS87_08510
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
GDS87_08510
Enzymes [BR:
lpak01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
GDS87_08510
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
QGG50996
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Position
1831958..1833202
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AA seq
414 aa
AA seq
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MRYLEQQDRAISNAIQQELSRQRDNIELIASENFVSRAVMEASGTILTNKYAEGYPGRRF
YAGCEHVDIVEELAIQRVKELFGAEHANVQPHSGAQANMAVYYASVKSGDTILGMDLSHG
GHLTHGSPVNFSGKFYNFVPYGVDKETGRIDFDQVRKLAHQHRPRMIVAGASAYPRMIDF
ELFAQIANEVGALFFVDMAHIAGIVAAGLHPNPLPHAHFVTTTTHKTLRGPRGGIVMCRK
SWAQAIDKAIFPGLQGGPLMHIVAAKAIAFGEALNPDFKRYIKNVLENAKVLAETFISEG
LTVVSGGTDNHIILLDLRTVGLTGKEAEAILDEVGITANKNTIPHDTTNPLVTSGIRFGT
PAITTRGLGPKEMKEIAQFIALALKNPKNTTVKNQILDSVREITSQFPLYEGLN
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgagatatttagagcagcaagacagggcgataagtaatgccatccagcaagagctttca
cgacaacgggataacatcgagttaattgcctcagagaattttgtcagtcgggcggttatg
gaggcatctgggacaatacttaccaataagtacgcagaggggtatccagggcgtagattt
tacgcaggctgtgagcatgtagatattgttgaagagcttgccattcagcgtgtgaaagag
ctgtttggtgctgaacatgcgaatgtacagccacattctggggcacaggccaatatggcg
gtttattatgcttctgtcaaatcaggagatacaatcttgggcatggatttatcgcatggg
ggacatctcacacatggtagtcccgtgaatttttcaggaaaattctataattttgttcct
tatggtgtagataaagaaacagggcgaattgattttgatcaagtccgaaagctagctcat
cagcatagaccgcgtatgattgttgctggtgccagtgcctatccaagaatgattgatttt
gagttattcgctcaaattgcgaacgaggttggtgcccttttctttgtggatatggcacat
attgcagggattgtcgctgctgggctacatcctaatcctttaccacatgctcattttgta
accacgactactcataaaacgttacgtggaccaagagggggtattgttatgtgccgtaaa
tcttgggcacaagcaattgataaagctattttcccgggattacagggggggcctcttatg
catatcgtcgccgcaaaagccattgcgtttggagaggcactaaatccagattttaagaga
tatatcaagaacgtactggaaaatgccaaagtattagcggaaacatttataagtgaagga
ttaaccgttgtctcgggaggaacagataatcatattatcttacttgatttgcgtacggtt
gggcttactggtaaagaagctgaagcaatactcgatgaagtgggcattacagcaaataaa
aataccatccctcatgatacaaccaatccattagttactagtgggattcgatttggtacg
cctgcaattacaactaggggattgggtccaaaggaaatgaaggaaattgctcaatttatt
gcactggccctaaaaaatcctaagaacacaacggttaaaaatcaaatattggatagtgtg
agagaaatcacatctcaatttcctttatatgaaggacttaattaa
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