Lysinibacillus pakistanensis: GDS87_08950
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Entry
GDS87_08950 CDS
T06280
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K19224
peptidoglycan DL-endopeptidase LytE [EC:3.4.-.-]
Organism
lpak
Lysinibacillus pakistanensis
Brite
KEGG Orthology (KO) [BR:
lpak00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lpak01002
]
GDS87_08950
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lpak01011
]
GDS87_08950
Peptidases and inhibitors [BR:
lpak01002
]
Cysteine peptidases
Family C40
GDS87_08950
Peptidoglycan biosynthesis and degradation proteins [BR:
lpak01011
]
Peptidoglycan biosynthesis and degradation
Endopeptidase
GDS87_08950
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NLPC_P60
LysM
Peptidase_C92
LysM3_LYK4_5
CHAP
LysM2_CERK1_LYK3_4_5
LysM_RLK
LRAT
DUF6950
Motif
Other DBs
NCBI-ProteinID:
QGG51079
LinkDB
All DBs
Position
complement(1928575..1929195)
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AA seq
206 aa
AA seq
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MKKNKKYRWGWGIKLAALALSSSVLFSSLETASAATYTVKSGDSLWKIASQQGVSLQTLM
SWNHLSSSTIYIGQKLNLNTTHSTVPKSPANLVQIAKQQLGVKYTFGGTKPSTGFDCSGY
ITYVYNNAGISTPRKTAAGFYNTAEKVSTPKVGDLVFFANTYKAGISHVGIYVGNNQMIN
ASNSGVTIANINSSYWKKYFVGYGRL
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagaataaaaagtatagatggggatggggaataaaattagcggcactagcatta
agttcatctgtacttttttcatcgcttgagacagcatctgctgcaacgtacacagtaaaa
tctggtgattctttatggaaaattgctagtcaacagggagtttctttacaaacattaatg
agctggaatcatttatcttcttccacgatttatattggccaaaagttaaaccttaatacg
acgcactctactgtacctaaatcacctgccaatctagtacaaattgccaaacaacaactt
ggtgttaaatatacatttggaggaacgaaaccaagcacaggtttcgattgctcaggatac
atcacctatgtttataataatgcgggtatttcaacgccacgtaaaacggctgctggcttt
tacaatacggccgaaaaagtaagtacacctaaagtaggtgatttagtatttttcgcaaat
acatataaagcaggcatttcccatgtaggtatttatgttggtaataatcaaatgatcaat
gcaagcaatagtggtgtgacgattgctaatattaatagttcttattggaagaagtacttt
gtaggatatggccgtttatag
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