Lysinibacillus pakistanensis: GDS87_10260
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Entry
GDS87_10260 CDS
T06280
Name
(GenBank) ATP-binding cassette domain-containing protein
KO
K14698
ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
Organism
lpak
Lysinibacillus pakistanensis
Pathway
lpak02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lpak00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
GDS87_10260
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lpak02000
]
GDS87_10260
Transporters [BR:
lpak02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
GDS87_10260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_22
AAA
Zeta_toxin
AAA_29
AAA_21
RsgA_GTPase
AAA_18
AAA_30
AAA_5
AAA_15
AAA_25
AAA_16
nSTAND3
Cytidylate_kin
AAA_33
AAA_24
nSTAND1
AAA_23
NACHT
Motif
Other DBs
NCBI-ProteinID:
QGG51321
LinkDB
All DBs
Position
complement(2179669..2181465)
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AA seq
598 aa
AA seq
DB search
MVEQIEKKEHWIMSILQFTGSSKVPLALSVILAIMSVIGGLVPYVAVYEILLLLIEGTQT
MQRLLFWIAIAAAGYIALTVFHAISSYFSHRAAYHILEEIRLQLAERLIRAPLGHIINQP
VGKIKNVLIDRVETLELPLAHIIPEGISNLFLPIGVFIYMLTIDYRLALASLITVPFALI
VYAFMMRNFNTQYQHYMEASNHVNSVIVEYVEGIEVIKTFNQTNASYEKFTNAITDFKNY
TMQWFRGTWPWMTLGNAILPSTLVGTLPIGLWLYYQGAINPAQIIICLILSMGLIYPLMK
FTVFINDFKAIEYAIADTKAYLNLESLPITEEIIALEHYDIDLNDISFSYNDEQNVLHQL
SLTIPEKSYTALVGPSGSGKSTIAKLLARFWDVTDGSITIGHTNIQDIHPNKLAKKISYV
AQDNFLFKTSLFENIRMGNPQASDEEVYHAARLARCDTFIARLENGYDTDSGEAGNKLSG
GEKQRIAIARAILKNAPIIILDEATAFTDPENEAEIQKAFNELAKDKTLIVIAHRLSTIK
HADQIVVLKDGSIHKIGTHNELLATNELYQTLWKAHIGSKEHGLLSDTNPSQEVSLND
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggtggaacagattgaaaaaaaagaacattggataatgtctattctccaatttacaggg
agctctaaagtaccacttgctttatccgttatcttggccattatgagtgtcataggcggg
ctagttccatatgtggctgtttatgaaatactactgcttttaattgaaggaacccaaaca
atgcagcgtcttcttttttggattgctatagcagctgctgggtacatcgctttaacagta
tttcatgcaatttctagttatttctctcaccgtgctgcctatcatattttggaggaaatt
cgtctgcaactagctgaacgattaataagagcacctctaggtcatattataaatcaacca
gttggtaagattaaaaatgtcctcattgatcgtgtggaaactttagaattgccattagca
catattattccagaaggtatctcaaatctctttctgcctataggtgtttttatctatatg
ctgacgattgactatcgactagctcttgcctctcttattacagttccatttgcactgatt
gtgtatgcctttatgatgagaaatttcaacacccagtatcaacactatatggaggcaagt
aatcatgtaaatagtgttatcgtagaatatgtggagggtattgaggtcattaaaaccttt
aatcaaacaaatgcttcctatgaaaaattcacgaatgcgattacagattttaaaaattat
acaatgcaatggtttcgtggcacatggccgtggatgacattaggcaatgctattttacca
tctacccttgtaggtactttgcccatcggtttatggctatattatcagggcgctattaat
cctgcacaaataatcatttgccttattttatccatggggcttatttatccacttatgaaa
ttcactgtttttatcaatgatttcaaggcgattgaatatgctattgctgatacaaaagca
tacttaaatttagagtcacttcctattacagaagaaataatagctttggagcattatgat
attgacttgaatgatatttcgtttagctacaatgatgaacagaatgtgcttcaccaactt
tctttaaccattcctgaaaaaagctatacagcacttgtaggcccttctggaagtggaaaa
tcaacaattgccaagcttttagcacgtttttgggatgttactgacggttccattacgatt
ggacataccaatattcaagatattcaccctaataagctggcaaaaaagattagctatgtt
gcacaggataattttttatttaaaactagtctttttgaaaacattcgaatgggaaatcca
caggctagtgatgaggaagtctatcatgccgcacgtttagcaagatgtgatacgtttatt
gcacgactagagaacggctatgatactgattctggtgaggcaggcaacaagctatctggt
ggggaaaagcaacgtatcgccatagcacgtgctatcttaaaaaacgctccaatcataata
ctggatgaagcaacagcctttactgatccagagaatgaagcagaaatacaaaaagctttt
aacgagctagcgaaagataaaacgctcattgtcattgctcatagattatccacgattaaa
catgctgatcaaattgtcgtgttaaaggatggcagtatccataaaattggcacccataat
gaattgctcgcaacgaatgaactttatcaaacattatggaaggctcatattggttcaaaa
gaacatggactcctctctgatacaaatccatctcaggaggtatctttaaatgattaa
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