Lysinibacillus pakistanensis: GDS87_12855
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Entry
GDS87_12855 CDS
T06280
Name
(GenBank) TrmB family transcriptional regulator
KO
K23356
HTH-type transcriptional regulator, sugar sensing transcriptional regulator
Organism
lpak
Lysinibacillus pakistanensis
Brite
KEGG Orthology (KO) [BR:
lpak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lpak03000
]
GDS87_12855
Transcription factors [BR:
lpak03000
]
Prokaryotic type
Helix-turn-helix
Other families
GDS87_12855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrmB
Regulator_TrmB
DUF7342
HTH_IclR
E2F_TDP
SHE3
PadR
SAMD1_WH
FeoC
Motif
Other DBs
NCBI-ProteinID:
QGG51777
LinkDB
All DBs
Position
complement(2685351..2686133)
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AA seq
260 aa
AA seq
DB search
MDELIAQLKELGFTEYEAKAYTALVQKSHISAYQVSKNSGIPRARIYDILDVLVEKGLVL
KEEAADQTTYCSIPVEMFLQQIQQRWQSNFTSISDQLEKLESKEQEAEPKVLMLKGRQTI
INYCQSLLKKAEKKVLLSMWEEMYEALREDIYGVAEQVAVHGITLYVDEPVSSIDRHRMT
YYTKKTSTPHWFILSIDGQEMIYGHSPSNLETAFITNDPVHIYLLEDYIWHDVLINRLLR
RDDHELEEWITKERKAFFVE
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atggatgaattaatcgcccaattaaaagagctaggatttacagaatatgaggctaaagcc
tatacagcacttgtacaaaagagccatattagtgcatatcaggtcagcaaaaattctggt
attcctcgagcaagaatttatgacatactggatgtactcgttgaaaaaggattagtgcta
aaagaggaagctgctgatcaaacaacctattgttctattcctgttgagatgtttcttcag
caaatacagcagcgttggcaatcgaattttacgtctattagtgatcaattagaaaaatta
gaatcgaaggagcaggaagcggagcctaaagtgttaatgctaaaaggcaggcagacaatt
attaattattgtcagtcattattaaaaaaagcggagaaaaaggtacttctttctatgtgg
gaagagatgtatgaagcattacgagaggatatttacggagtggctgaacaggtcgctgta
cacggtattacgctatacgtggatgaacctgtgtcatccattgataggcatcgaatgacc
tattatacaaaaaaaacttccactccccattggtttatcttgtctatcgatgggcaagag
atgatttatggacattctccttcaaatcttgaaaccgcttttattactaatgatccggtt
cacatctatttattagaagattatatttggcatgacgtcctgattaatcgtctactaaga
cgagatgatcatgagcttgaggaatggattacgaaagaacgaaaagcattttttgtagag
taa
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