Lysinibacillus pakistanensis: GDS87_13210
Help
Entry
GDS87_13210 CDS
T06280
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
lpak
Lysinibacillus pakistanensis
Pathway
lpak03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
lpak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
GDS87_13210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpak03400
]
GDS87_13210
DNA repair and recombination proteins [BR:
lpak03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
GDS87_13210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
NNH2
CDC24_OB3
Motif
Other DBs
NCBI-ProteinID:
QGG51840
LinkDB
All DBs
Position
2759311..2760129
Genome browser
AA seq
272 aa
AA seq
DB search
MHTVWKGSISFGLVNIPVKLHAATENKDIKLRQLHKECHTPISYKKVCEGCNQEVKEEDI
VKAYEYAKNKFVVLDQEELENLRKENEDKAVEIIDFVKLTEIDPIYFERTYFLSPDTTGS
KAYALLRQTLEQSGKIGVAKIIIRSKEQLAVVRVYQNALVMETIHYPDEVRSVSDVPNIP
SEQTVVPKELETALMLVEQLTTEFNPDKYTDDYRNALMELIEEKKATSTISASDKRPVPD
NVTDLMTALQASLDKTKKPAPRKRTTRTKKNA
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgcatacagtgtggaaaggtagtatttcatttggtcttgtcaatataccagtgaagcta
catgctgcaacggaaaataaagatattaaattacgccagcttcataaagaatgtcatacg
ccgatcagctataaaaaagtttgtgaaggctgtaatcaagaagtaaaagaagaagatatc
gtcaaggcctatgaatatgccaaaaataagtttgtcgttttagatcaagaagaattggaa
aacttacgcaaggaaaatgaagataaggctgtagaaattattgattttgtcaaattaacg
gagattgatccgatttattttgaacgcacttattttttatcgccggatactactggcagt
aaggcctatgccctattacgtcaaacattggagcaatccggcaagattggtgtagccaaa
attattattcgctctaaggagcagttggccgttgtccgcgtttatcaaaatgccttagta
atggaaaccatccattatcctgatgaggttagaagtgtaagcgatgtaccaaatattcca
agtgaacaaacagttgtaccaaaagagctggagaccgccctaatgctggtagagcaatta
actacagagtttaatcctgataaatacacagatgactaccgaaatgccctaatggagcta
attgaggagaaaaaagcaacaagtacaatttcagcgagcgataaacgcccagttcctgat
aatgttacagacctcatgacagcactccaggcttcattagataaaacaaagaaaccagca
ccaaggaaacgtactacaagaacgaagaaaaatgcttaa
DBGET
integrated database retrieval system
