Lysinibacillus pakistanensis: GDS87_13885
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Entry
GDS87_13885 CDS
T06280
Symbol
lsa
Name
(GenBank) Lsa family ABC-F type ribosomal protection protein
KO
K19350
lincosamide and streptogramin A transport system ATP-binding/permease protein
Organism
lpak
Lysinibacillus pakistanensis
Pathway
lpak02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lpak00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
GDS87_13885 (lsa)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lpak02000
]
GDS87_13885 (lsa)
01504 Antimicrobial resistance genes [BR:
lpak01504
]
GDS87_13885 (lsa)
Transporters [BR:
lpak02000
]
ABC transporters, eukaryotic type
Other subfamilies
Macrolide exporter
GDS87_13885 (lsa)
Antimicrobial resistance genes [BR:
lpak01504
]
Gene variants
Macrolide resistance genes
Transporters
GDS87_13885 (lsa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
Dynamin_N
AAA_29
RsgA_GTPase
KAP_NTPase
MMR_HSR1
ABC_tran_Xtn
AAA_15
Motif
Other DBs
NCBI-ProteinID:
QGG51963
UniProt:
A0ABX6DAY5
LinkDB
All DBs
Position
complement(2887472..2888950)
Genome browser
AA seq
492 aa
AA seq
DB search
MSMIQVQDLTFSYPGSFDNIFEGVNFQLDTDWKLGFIGRNGRGKTTFFNLLLGNYEYSGK
IISSVAFTYFPYPVSDKNKFTYEIFEEICPQAEDWEYLREISYLNVDAEVMYRPFKTLSN
GEQTKVLLAALFLAEGQFLLIDEPTNHLDTDARKVVSDYLRKKKGFILISHDRVFLDGCV
DHILSINRANIEVQSGNYSSWKLNFDRQQEHEEATNHRLQKDIERLKQSSKRSAGWSSQV
EASKNGTTNSGSKLDKGFVGHKAAKMMKRAKNIESRQQKAIEEKSKLLKNVEKTETLKLE
PLVFQTKQLLALADVSVQYDGQLVNQPISFKVEQGDRIVLDGKNGSGKSSILKLILGNPI
QHTGSINLGSGLIISYVQQDTSHLKGMLADFIEEHNIDETLFKSILRKMDFDRIQFEKDI
SHYSGGQKKKLLIAKSLCEKAHLYIWDEPLNFIDIYSRMQIEELIQKFNPTMVFVEHDQA
FQQTVATKTITM
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatgatacaagttcaagatttaactttttcctatccaggtagctttgataatatt
ttcgaaggcgtaaactttcaattagataccgattggaaacttgggtttatcggtagaaat
ggtcgaggtaaaacaacattctttaacctattattaggaaattatgagtatagtgggaaa
atcatttcatcagtagcatttacttatttcccatatcccgtttcagataaaaataagttt
acttatgaaatttttgaagaaatttgcccacaggcagaagattgggaatatcttcgtgaa
atatcctatttaaatgttgatgctgaagttatgtaccgaccttttaaaacattatcaaat
ggagaacaaacaaaggtgttgcttgctgcactttttttggctgagggtcagtttttatta
attgatgagccgaccaatcatctagacacggatgctcgtaaggttgtctctgattattta
aggaagaaaaaaggatttattttaatttcacatgatagggtctttttagatggttgtgtt
gaccatatcttatctatcaatagggcaaatattgaagttcaaagtggtaattattcttct
tggaagttaaattttgatagacagcaggaacacgaagaggctaccaatcatcgtctacaa
aaggacatcgagagattaaagcagtcttcaaagcgttcagcaggctggtctagtcaagtg
gaggcgtccaaaaatggcactacgaattcaggctctaagttagataagggctttgtagga
cataaagcagcaaagatgatgaagagagctaagaacatagaatcaaggcagcaaaaggct
attgaggagaagtcaaaactgctaaaaaatgtggaaaaaacggagaccttaaaattagag
ccattggtctttcagacaaagcaactactggctttggcagatgtatctgtacaatatgat
ggtcagctagtgaatcagccaattagctttaaagttgaacaaggtgatcgaattgtacta
gatggaaaaaatggtagcgggaaaagtagtatcctaaaacttattttagggaatccgata
cagcatacgggctctataaatcttgggtcggggcttattatttcctatgtccaacaggat
acgtctcatttgaagggaatgttagcggactttattgaggagcataacattgatgaaacg
ttatttaaatccatccttcgtaaaatggattttgaccgtattcagtttgagaaagatatc
tctcattattctggtggacaaaagaaaaagcttctaatagccaaaagtttatgtgaaaag
gctcatttatatatttgggatgaaccattaaattttattgatatttattcacgtatgcag
atagaagagcttattcaaaaatttaatcccacaatggtatttgttgagcatgatcaggca
tttcaacaaactgttgcaacaaaaacgatcactatgtag
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