Lysinibacillus pakistanensis: GDS87_16505
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Entry
GDS87_16505 CDS
T06280
Name
(GenBank) ComE operon protein 2
KO
K01493
dCMP deaminase [EC:
3.5.4.12
]
Organism
lpak
Lysinibacillus pakistanensis
Pathway
lpak00240
Pyrimidine metabolism
lpak01100
Metabolic pathways
lpak01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
lpak00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
GDS87_16505
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
lpak02044
]
GDS87_16505
Enzymes [BR:
lpak01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.12 dCMP deaminase
GDS87_16505
Secretion system [BR:
lpak02044
]
Type II secretion system
Competence-related DNA transformation transporter (DNA-T) core components
GDS87_16505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_1
MafB19-deam
Bd3614-deam
SNAD4
UDPG_MGDP_dh_N
Motif
Other DBs
NCBI-ProteinID:
QGG52435
LinkDB
All DBs
Position
complement(3432976..3433545)
Genome browser
AA seq
189 aa
AA seq
DB search
MERITWDQFFMAQSHLLALRSTCTRLAVGATVVRDKRIIAGGYNGSITGDEHCIEKGCYV
VDNHCVRTVHAEMNALLQCAKYGTPTKGADLYVTHFPCLPCTKSIIQAGIERVYYATDYK
NNPYAQELFEKAGVEVVHVPFDERKIDFLSDEKLALYIDMLNELRESGMSAEKLRPYEQK
VNALFGKNL
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atggagcgaattacttgggatcaattttttatggcacaaagccatcttcttgcgttgcgt
agtacatgtacaagactagctgttggcgccactgttgtacgagataaacgaattattgcg
ggtggctataatggctcaattacaggtgatgaacattgtattgaaaagggatgctacgtt
gtagacaatcattgtgtacgtacagtacatgctgagatgaatgcacttctgcaatgtgct
aaatatggtacacctacaaagggtgcagacttatatgtgactcattttccatgtctccca
tgcacaaagtccataattcaagcgggtattgagcgtgtgtactatgcgacagattataag
aataacccgtatgcacaggaattatttgaaaaagcaggtgtggaggttgttcacgtacca
tttgatgaacgtaaaatcgactttttaagcgatgaaaaattagccttgtacatagacatg
ctaaatgagcttcgtgagagtggtatgtctgctgaaaaattgcgcccatatgaacagaag
gtgaatgcattatttggcaaaaatctttaa
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