Lysinibacillus pakistanensis: GDS87_16940
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Entry
GDS87_16940 CDS
T06280
Symbol
secDF
Name
(GenBank) protein translocase subunit SecDF
KO
K12257
SecD/SecF fusion protein
Organism
lpak
Lysinibacillus pakistanensis
Pathway
lpak02024
Quorum sensing
lpak03060
Protein export
lpak03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
lpak00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
GDS87_16940 (secDF)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
GDS87_16940 (secDF)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GDS87_16940 (secDF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
lpak02044
]
GDS87_16940 (secDF)
Secretion system [BR:
lpak02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
GDS87_16940 (secDF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecD_1st
SecDF_P1_head
Sec_GG
MMPL
PIG-F
POTRA
Motif
Other DBs
NCBI-ProteinID:
QGG52514
UniProt:
A0ABX6DHE0
LinkDB
All DBs
Position
complement(3525190..3527457)
Genome browser
AA seq
755 aa
AA seq
DB search
MKLKSRIVAFVLLMVIFVATIGTTVGGVLKDIKLGLDLQGGFEVLYEVKELKEGQKITPE
VVSATASALSKRVNAIGVSEPSIQVEDKNRIRVQLAGVEDQASARKLLSTSANLTFRDVD
DNLLLDGDDLKPGGAKDSFDQQNRPIVSLTLKDAKKFADITSKIAAKPAGENLLVVWLDF
EEGVDSYKAESQKAKPRYASAATVSQTLDTTDVMISGNFTVEETKNLAGILEAGALPVKL
DEIYSTSVGAQFGDQALKSTIFAGIVGVVLIFLFMLFYYRLPGLISIITLAIFTFLVLVV
FDWINAVLTLPGIAAIVLGIGMAVDANILAAERIREELRVGYSVKQAFQIGSKQSLSAII
DAQLTTLLAAAVLFQFGTSSVKGFATTLIISILLSFLTAVWGSRVLLGLLVNSGYINNPA
WFGIAKSKQHSLDENIGTLDLSTKFDRFDFVHNRKKFYTFSLAILVAGLVVLGIFRLNLG
IDFTKGTRVQIEADQTLVKEEVSKYLDSIDFPSEDIVLTGEKSNSAVIRYNHDLSQAEIL
KFKKEAGKKYGHEPGVSTVSPTVGKELAKNAIKALSLAAIGIIIYVAVRFEWRMGVGAVV
SLLHDVFLIVAVFSFMRLEVDITFIAAVLTIVGYSINDTIVTFDRMRENLDRYDTIKDRE
VLADIVNKSLRQTMGRSVNTVLTVIIVTVALLILGAPSIQNFSIALLVGLITGMYSSICI
AAQIWYSLKIREMKKSDGQIHKKEKKQWGTDEPVV
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atgaaactaaaaagtcgtatagttgcattcgtactattaatggttatttttgtagcaacc
atcggtacgactgtaggcggcgtcttaaaggacattaagctaggccttgacttacagggc
gggtttgaggttctttatgaggtgaaagaattaaaagagggacaaaaaattacaccagaa
gtagtgtctgcaacagcatcagctcttagtaaacgtgtaaatgctatcggggtaagtgaa
ccgagtattcaggttgaagacaaaaatcgcattcgtgtgcaattagccggtgttgaagac
caagcatcagcacgtaaattattgtctacttctgcaaatttaactttccgtgatgttgat
gacaatttactattagatggtgatgacctaaagccaggtggagcaaaggattcctttgac
cagcaaaatcgtccaattgtatcattaacgttaaaggatgcgaaaaaatttgctgatata
acaagtaaaattgcggctaaaccagcaggtgaaaatttactcgttgtatggctagatttt
gaagagggtgtggattcatataaagctgaatcacaaaaagcgaagcctcgctatgcatct
gcagcaacagttagccaaacattagatacaacagatgttatgattagtggtaacttcaca
gttgaagaaacgaaaaatttagctggtattttagaggctggggcacttccagtaaagctt
gatgaaatctattctacgtcagttggtgcacaatttggtgaccaagctttaaaaagtaca
attttcgcaggtattgtgggtgtagttttaattttcttatttatgctattctattaccgt
ttacctggcttaatttccattattacacttgccattttcactttcttagtattagttgta
tttgattggattaatgcagtgttaacacttccaggtattgcagcaattgttcttggtata
ggtatggctgttgatgccaatattctagcggctgagcgtattcgtgaggaactacgtgta
ggttattcagtaaaacaagcattccaaattggctcgaagcagtctttatcagcaattatc
gatgcacagctaactacattattagcagctgctgtattattccaattcgggacaagctct
gttaaagggtttgcaacaacattaattattagtattttactaagcttcttaacagctgtt
tggggttctcgtgtactattaggtttacttgtcaacagtggatatatcaataatccagct
tggtttggtattgcaaaatctaaacagcatagcttagatgaaaatatcggtacattagat
ttatcaacaaaatttgatcgttttgactttgtacacaatcgtaagaaattctatacattc
tcattagctattctagtagctggtttagtggttcttggtattttccgcttaaacctgggt
attgatttcacaaaaggtactcgtgtgcaaattgaagcggatcaaactttagttaaagaa
gaagtatctaaatacttagatagtatcgacttcccatctgaagatatcgttttgacaggt
gaaaagagtaactccgcagttattcgttataaccatgacctatcacaagcggaaatttta
aaattcaaaaaagaagctggcaaaaaatatggtcatgagcctggcgtaagtacagtatca
ccaactgtaggtaaagagcttgcgaaaaatgctattaaagcattgtcacttgcagctatc
ggtatcattatctatgtagcggttcgtttcgagtggcgcatgggtgttggggcagttgtt
tcgttactacatgatgtattcttaattgttgcggtatttagttttatgcgtttagaggtt
gatatcacatttatagcggcggtattgacgattgttggttactccattaatgacacgatt
gttacgtttgaccgaatgcgtgaaaacttagatcgatatgatacgattaaagaccgtgaa
gtgttagcggatatcgttaacaaatcacttcgtcaaacaatgggtcgatctgttaacaca
gtgttaacagttattattgtgacagtggcacttcttattttaggtgcaccatcgattcaa
aacttctcaattgcgttattagttggtttaataacaggtatgtattcatctatctgtatt
gctgcacaaatctggtattcattaaaaattcgtgaaatgaaaaaatcagatggtcaaatt
cacaaaaaagagaaaaaacaatggggaactgatgagcctgttgtttaa
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