Lysinibacillus pakistanensis: GDS87_17695
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Entry
GDS87_17695 CDS
T06280
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
lpak
Lysinibacillus pakistanensis
Pathway
lpak00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lpak00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
GDS87_17695
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lpak01007
]
GDS87_17695
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lpak03016
]
GDS87_17695
Enzymes [BR:
lpak01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
GDS87_17695
Amino acid related enzymes [BR:
lpak01007
]
Aminoacyl-tRNA synthetase
Class II (U)
GDS87_17695
Transfer RNA biogenesis [BR:
lpak03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
GDS87_17695
Prokaryotic type
GDS87_17695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
tRNA_bind
B5
Motif
Other DBs
NCBI-ProteinID:
QGG52652
LinkDB
All DBs
Position
complement(3681644..3684061)
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AA seq
805 aa
AA seq
DB search
MLVSLEWLKDYVSTQNLVPEQLAEKITRSGIEVDAVIDRANGMDKVVVGYVVSKEKHPEA
DKLNICQVDVGEAELQQIICGAPNVDAGQKVIVARPGAHLPGGIKIKKAKLRGHESNGMI
CSLQELGIEGKLVPKAYSEGIYVLPADVEIGSDALAILGLRDTVLELGLTPNRSDALSML
GVAYEVGAILSEEVKYPEISYNTSTEKAEDKLKLRVEDLQANPMYVAKVVKNVKIAESPM
WLQNRLMAAGVRPHNNVVDITNYILMEYGQPLHAFDYDSLATGEIVVRKATEGEQITTLD
DQERTLKATDLVITNGKEPVAIAGVMGGANSEVTESTTTVVIESAYFDGLTVRQTSRRLG
LRSDASARFEKGVDPNRVLPAAERAAALLAELAGGEVLEGTCLVDELDKTPARVVVSPDF
INERLGMKISLEDMLSILERLKFSVEAANGLLIIDAPTRRQDIKIEEDIVEEIARLFGYD
EIPMTLPEGATQVGGLTPYQAHRRVVRNFMEGAGLYQAVTYSLTSEALSQRFALKAEPVT
RLLMPMSEERSTLRQSLIPHLIEAAAYNVARQAESVALYEVGSVFLGQLEEGQPYEEEHV
AAVLTGKWLDHAWQGEKKAVDFFVLKGIVEGVIGKLGLENRISFVQAQVDGLHPGRTANI
LLDGEQVGIIGGLHPAEQKAWGVKDTYVMEMNLVALLNATEQEEPLAYTSVPRFPAMSRD
IALIMNRATTAGEVITAIRSAGVKLLKDVRVFDVYEGEKMEPGKKSVAFSLTYLDPERTL
TDEEVVAAHNKVLKAIATIEGTEVR
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgttagtttcattagaatggttaaaagattatgtaagtacacagaatttagtgcctgag
cagttagcggaaaaaattacgcgctctggaattgaggtagatgcagtaattgatcgtgct
aacggaatggataaagttgtagtgggctatgtcgtatcaaaagaaaaacaccctgaagcg
gataaattaaatatttgccaagtggatgttggcgaagcagagctacaacaaattatttgc
ggcgcaccaaatgttgatgcgggacaaaaagttattgtggctcgtccaggtgcacattta
ccaggtggcattaaaataaaaaaagcgaaacttcgtggacatgaatcaaatggtatgatt
tgttcgttgcaagagctaggaatcgaagggaagcttgttcctaaagcatattctgagggg
atttatgtacttcctgctgatgttgaaattggttcagatgcccttgctattttaggttta
cgagatacagtactagagctaggtttaacaccaaatcgatcagatgcactgtcaatgcta
ggtgtagcatatgaagttggtgcaattctttcagaagaagtgaaatatccagaaatttcc
tataacacatctactgaaaaagcggaagacaagttaaagcttcgagtagaagatttgcaa
gcaaacccaatgtacgttgctaaagttgtgaaaaatgtaaaaattgcagaatcaccaatg
tggctacaaaatcgtttaatggctgcaggtgttcgtccacacaataatgttgtggatata
acgaactacattttaatggaatacggtcaaccgcttcatgcctttgactatgatagcctt
gcaacaggtgaaatcgttgtccgtaaagcaacagagggtgaacaaattacaactttagat
gaccaagaacgtacattaaaagcgactgatttagtgattactaatggtaaggaaccagta
gctattgcaggtgtaatgggtggcgcaaattctgaggtaacagagtctactacaacagtt
gttattgaatctgcttatttcgatggcttaactgtacgccaaacttcacgtcgtcttggc
ttgcgctcagatgcttctgctcgtttcgaaaagggtgttgaccctaaccgtgtgttacca
gcagcagaacgtgcagcagctttattagctgaacttgctggtggggaagtgttggaaggc
acatgtcttgtcgatgaactggataaaacaccagctcgtgttgttgtgtccccagacttt
attaatgagcgtttaggaatgaaaatttctttagaggatatgctttctattttagaacgt
ctgaaattcagtgtagaggcagcgaacggcttgttaataattgatgcgccaacgcgtcgt
caagatatcaaaattgaagaggatatcgttgaggaaattgctcgtttatttggttatgat
gaaatcccgatgacattaccagagggtgctacgcaagtaggtggtttaacaccttatcaa
gcacatcgtcgtgtagttcgtaattttatggagggagcagggctttatcaggctgtaacc
tattcattaacatctgaggcactgtcacagcgctttgcattgaaggctgagccagtcact
cgcttgctaatgcctatgagtgaagaacgttcaactttacgtcagagtctaattccacat
ttaattgaagcagcagcttataatgtagcgcgtcaagctgaaagcgtggcactttatgag
gttggttctgtgtttcttggtcaactagaagaagggcagccatatgaggaagagcatgta
gcagcagttttaacaggaaaatggttagatcatgcttggcagggtgagaaaaaagcagtt
gacttctttgtcttaaaaggcattgtagagggcgttattggtaagcttggtttagaaaat
cgcatttcattcgtgcaagcacaagtcgatggcttgcatccaggacgcacagctaacatt
cttttagatggtgagcaagttggcattattggtggtttacatcccgcagagcaaaaagcg
tggggtgttaaagacacatatgtcatggaaatgaatttagtagcattattaaatgccact
gaacaagaagaaccgcttgcctacacatcggtgccacgcttcccagcaatgtctcgtgat
atcgctttaattatgaatcgcgctacaactgcaggagaagtcatcacagctatccgttca
gctggcgtaaaattattgaaagacgttcgtgtatttgatgtttacgaaggtgaaaaaatg
gagccaggtaaaaaatctgttgcattctcactcacttaccttgatccagagcgaacttta
acagatgaagaagttgttgcagcacataacaaagtgctaaaagctattgcaacaattgaa
ggtacagaagtacgttaa
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