Lysinibacillus pakistanensis: GDS87_17890
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Entry
GDS87_17890 CDS
T06280
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
lpak
Lysinibacillus pakistanensis
Pathway
lpak03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lpak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GDS87_17890 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpak03400
]
GDS87_17890 (mutM)
Enzymes [BR:
lpak01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
GDS87_17890 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
GDS87_17890 (mutM)
DNA repair and recombination proteins [BR:
lpak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GDS87_17890 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
DNA_ligase_ZBD
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
QGG52686
LinkDB
All DBs
Position
complement(3720601..3721473)
Genome browser
AA seq
290 aa
AA seq
DB search
MPELPEVEGVVQALKPKMEGRTIQQVQLSEVIRFSFGEGKQCIIKQAEPDAFEMSLTQMT
ITKIERRAKYIFFHMRKENVPYVLVSHLGMTGAWFVVNSPEEINEAKFQKHIHATFKMAD
GGFLIYSDIRRFGELRFLEKIEDHAPLTKMAPEPFDEIACDYFIAQSKLPKYEKKSVKEV
IMDGQVISGCGNIYATEALFAQKIHPARKMNRISEKRKRALFEAVVTVLRQSINAGGSTI
SDYRNINGEAGSMQNRLQMYGKKMCPVCDTPTSQMTIGGRTSVFCPNCQH
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattaccagaggttgaaggtgtcgtccaggcattaaagcctaaaatggaggga
cggacaatccaacaggtgcagctttctgaggtaattcgtttttcctttggggaaggaaaa
caatgtattatcaagcaagctgagcctgatgcctttgaaatgtccttaacccaaatgacc
attacaaaaattgagagacgtgcaaagtatatcttttttcatatgcgtaaagagaatgtt
ccatatgtgcttgttagtcatttagggatgacaggtgcatggtttgtggtaaattcgcca
gaggaaatcaatgaagcgaaatttcaaaagcatatacatgctactttcaaaatggcagat
ggcggttttttaatttattcagatattcgccgttttggtgaacttcgttttttagaaaaa
attgaagaccatgcaccgttaacaaaaatggcaccagaaccattcgatgaaatagcttgt
gattattttattgctcaatcaaaattaccgaaatatgaaaagaaatccgtaaaggaagtc
attatggatggacaggtaatttcgggttgtggcaatatttatgcaactgaggcattattt
gctcaaaaaattcatccagctcgcaaaatgaaccgtatcagtgaaaagcgtaaacgtgca
ctatttgaagcggttgttactgttttacgtcaaagcattaacgcaggaggttcaacgatt
tcagattatcgtaatattaatggtgaggctggaagcatgcaaaatcgacttcagatgtat
gggaaaaagatgtgtccagtgtgtgatacgccaacgagccaaatgacaattggtgggcgc
acgtctgttttttgcccaaattgtcaacattaa
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