Lysinibacillus pakistanensis: GDS87_18335
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Entry
GDS87_18335 CDS
T06280
Name
(GenBank) pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
lpak
Lysinibacillus pakistanensis
Brite
KEGG Orthology (KO) [BR:
lpak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lpak03009
]
GDS87_18335
Enzymes [BR:
lpak01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
GDS87_18335
Ribosome biogenesis [BR:
lpak03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
GDS87_18335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
QGG52773
LinkDB
All DBs
Position
complement(3824917..3825630)
Genome browser
AA seq
237 aa
AA seq
DB search
MRLDKLLANMGYGSRKEVKQLLKQKAVTVDGAYVKDAALHVDPEKQDVSVFGERVVYTEF
VYFMMNKPPGVISATEDVRDETVIDLLEPLHQHFQPFPVGRLDKDTEGLLLLTNDGQLAH
NLLSPKKHVPKVYYAQIEGLVTEEDCKKFAQGVELDDGYVTKPGELIILKSDLQSEIELT
IQEGKFHQVKRMFESIGKRVTYLKRLSMGSLKLDDNLALGEYRELTTKELTALQNRD
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttagataaattactagcaaatatggggtatgggtcacgcaaggaagtgaagcag
cttcttaagcaaaaggcagtaactgtggatggtgcatatgtaaaggatgcagcattgcat
gtagaccctgaaaaacaagatgtttccgtttttggtgaacgtgttgtttacacagaattt
gtatactttatgatgaataaacctcctggcgttatttctgcaacagaggatgtacgagat
gagacggtcattgatttgttagagcccttacatcaacattttcagccttttccagttggg
cgcttagataaagatacagaaggattgctgctgttaacgaatgacggtcagctagcacat
aatttattatctcccaaaaagcatgtgcctaaagtttactatgcgcaaatagaaggactt
gtgacagaggaagactgcaaaaaatttgcacagggcgtagagctggacgacggttatgtg
acaaaaccaggcgagctcattatcttaaaatctgaccttcaatcagaaatcgagctaacc
attcaagaaggtaagtttcatcaggtgaagcgtatgtttgagtctattggtaagcgtgtt
acctatttaaagcgtttatcaatgggaagccttaagcttgatgacaatttagctttaggg
gaatatagagaattaactacaaaagaactaacagccttacaaaatagggattaa
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