Lysinibacillus pakistanensis: GDS87_20015
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Entry
GDS87_20015 CDS
T06280
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
lpak
Lysinibacillus pakistanensis
Pathway
lpak00061
Fatty acid biosynthesis
lpak00071
Fatty acid degradation
lpak01100
Metabolic pathways
lpak01212
Fatty acid metabolism
lpak02024
Quorum sensing
lpak04146
Peroxisome
Module
lpak_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
lpak00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
GDS87_20015
00071 Fatty acid degradation
GDS87_20015
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
GDS87_20015
09145 Cellular community - prokaryotes
02024 Quorum sensing
GDS87_20015
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
lpak01004
]
GDS87_20015
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lpak04147
]
GDS87_20015
Enzymes [BR:
lpak01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
GDS87_20015
Lipid biosynthesis proteins [BR:
lpak01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
GDS87_20015
Exosome [BR:
lpak04147
]
Exosomal proteins
Exosomal proteins of breast milk
GDS87_20015
Exosomal proteins of breast cancer cells
GDS87_20015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
GATase_6
Motif
Other DBs
NCBI-ProteinID:
QGG53047
UniProt:
A0ABX6DGS8
LinkDB
All DBs
Position
complement(4164322..4165869)
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AA seq
515 aa
AA seq
DB search
MNLVSSVHQQAVQQPDKIAYHFMGKDTTYGEFELTVGRFAKGLQELGVEKGDHVAFLLGN
TPHYLIALYATMRLGATAIPINPIYTPDEISYILHNGDVKAVIALDALLPLVEKGVQAFP
QVTSFIICETTADTAEKIAALSQEAKVKTHLFTQVIANVSDSLQPVEVADDDNAIILYTS
GTTGTPKGAMLTHENIYSNARDVAHYLGYKADDRIIATLPVFHVFALTVVANAPLLSGAT
VLLAPRFSPTEIFALAREQKATVFAGVPTMYNFLYQLPEGNPEDFSTIRLAISGGASLPV
ALLHNFEKKFNVRVSEGYGLSEASPVTCFNPLDRDRKAGSIGTSICNVENKVVDVNGQEV
PVGEVGELIVRGPNVMKGYYKLPEETAIAIRDGWLYTGDLAKVDEEGYFYIVDRKKDMII
VGGFNVYPREVEEVLFAHNNIVEAAVIGSPDPNLGEAVHAYVVLKEVAATSTEDLLAYCT
KHMVKYKVPKVIEIMDELPKNTTGKILRRSLKEKV
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
ttgaatttagtttcgagtgttcatcaacaagcagtgcaacagccagataaaattgcgtat
cattttatggggaaagatacaacatatggcgagttcgagttaacagttggacgttttgca
aaggggttacaagaattaggagtagaaaagggggaccatgtagcatttttattaggcaac
acaccgcattatttaattgccttgtatgcgacgatgcgcttaggtgctactgcaatacca
atcaacccaatttatacaccggatgaaatatcttatattttgcataatggcgatgttaag
gctgttattgcacttgatgcccttctacctctagtagaaaagggtgtacaagcttttcca
caagttacatcatttattatttgtgaaacgacagcagatactgcagaaaaaattgcagcc
ttgtcacaagaggcaaaagtaaaaacacatttatttacacaggtgattgctaacgtatca
gactctttacagcctgtagaagttgccgatgatgataatgccattattctctatacttct
ggaacaacaggaactccaaagggagccatgctgacacatgaaaatatttattctaatgca
cgagatgttgcccattatttaggctataaagcagatgatcgtattattgcaactttgcca
gttttccatgtatttgcgttaacagttgttgcgaatgcaccattattgagtggagctacg
gtattacttgcaccacgctttagtccaaccgagattttcgccttagcaagagagcaaaaa
gcaactgtatttgctggtgtacctacaatgtataattttttatatcaactacctgaaggc
aatccagaagatttctcgacaatccgcttagcaatatcagggggcgcttcattacctgtg
gcactattacataatttcgagaagaaatttaatgtacgtgtttcggagggctatggcttg
tcagaggcttcaccagtaacttgctttaatccattggaccgcgatcgtaaagcaggttca
attgggacatccatctgcaatgttgaaaataaagttgtagatgtaaacgggcaagaggta
cctgtcggtgaagtaggagagttaattgttagagggcctaacgttatgaagggatattat
aaactgcctgaagaaacagcgattgctatacgtgatggctggttatatacgggtgactta
gcgaaggttgatgaagaggggtatttctatatcgttgatcgaaaaaaagatatgattatt
gtagggggattcaatgtctatccaagagaggtagaggaagtactctttgctcataacaat
atcgttgaagcggcagttataggctctccagatcctaatttaggggaggctgttcatgca
tatgttgtcttaaaggaagtagcagcaacctccacagaggatctacttgcctattgtaca
aaacatatggtgaaatataaggttcctaaagtcatagaaattatggatgaactaccgaag
aatacaaccggaaagatattacgtcgctctttaaaggaaaaagtataa
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