KEGG   Lysinibacillus pakistanensis: GDS87_20935
Entry
GDS87_20935       CDS       T06280                                 
Name
(GenBank) AAA family ATPase
  KO
K03546  DNA repair protein SbcC/Rad50
Organism
lpak  Lysinibacillus pakistanensis
Brite
KEGG Orthology (KO) [BR:lpak00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lpak03400]
    GDS87_20935
DNA repair and recombination proteins [BR:lpak03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     GDS87_20935
    Archaeal homologous recombinant proteins
     GDS87_20935
SSDB
Motif
Pfam: AAA_23 SbcC_Walker_B SMC_N AAA_29 GTP_EFTU nSTAND_NTPase5 DUF5799 nSTAND3
Other DBs
NCBI-ProteinID: QGG53202
UniProt: A0ABX6DER5
LinkDB
Position
complement(4348961..4352041)
AA seq 1026 aa
MKPLKLTITAFGPYKNTEIIDFQQLGDHRLFAISGKTGAGKTTIFDAICYALYGSGSGED
RQDTAMLRSGFAEDDIYTTVELTFEMEGRIYHVLRQPGHIKAKNKSITGKKIELAEVKEG
KLDFGIVEKQQTLEVDKKLQEIIGLTKDQFSQIVMLPQGEFRKLLTSDSTNKEVILRKIF
KTDRFGAMTKKLDAKRKEAESDLLRAQQLKKHLLGQIAGALPQRPSFLFTCINDNTANMH
QVKKALEEEHAYYIECIQVEQQRYEEAYAHHQKEQEYYSMAKTLNEQFEEQSKRQSQLQA
LLQEQDVYTVKEREIALAEKAERLVLVEQQCIDLRNELNRKEQSYQQALMEQQNAEAQLI
VAQEKFNAEEAKEPERQRILQQEIQLQALLPKFEAYEHNLQQMQLAEQYVVTAKRSLADN
VALLEKEQLQLQQLTTTIEQYEKQLEPYESYLEQLPKLKEQVSLLAQVEKYTKAVETIEQ
DVMTANVGNLESKQALQKLEQQWITSQASILARQLKDGEPCPVCGSTTHLKTHLEQLENI
ELAQVEALRVKATTNERKFLEKEALLNSTKQLLQEALAQLETNHIDQTNQAQIVASLQFV
EQQITFLKIVNQQLVDVRMKQRQQRGSLELLQEKHIKLERYLADQTQELTKQRAIVEEQQ
KHIPENSKTLQSLKQAIADIASQKVVLQTAWHTSQQSLQTSKEAVNGAKKAVEITKQAVE
ELKLKMDERREQFSESMRIAGFRNFEEFTAAKRNEYQLEALRKACSDYTLQIHTLQVQIT
EGAKHLQGKEKQDLALMEEKLEKYRVTYEDAFKVLQQMKGFAKACEDFIERIEETAQEIR
LLEKEAGRVKELYAMLNGQNTKKLSFERYIQINYLDKITEAANVRLQHLSNGQFELRRSD
RLEKHAKQSGLGLDVYDAYTDQLRDVKTLSGGEKFNASLSLALGMADVIQSFQGNIHIET
MFIDEGFGSLDEEALNKAIDTLIDLQDSGRMIGVISHVAELKATMPAVLHVEKTMNGHSQ
TYFEVK
NT seq 3081 nt   +upstreamnt  +downstreamnt
atgaagccattgaagttaacaattactgcattcggtccatataaaaacacggaaataatt
gattttcaacagcttggtgaccatcgtttatttgcgatttctggtaaaacaggggctggt
aaaacgactattttcgatgctatttgttatgcgctatatggatcaggtagcggtgaggat
cgtcaggatacagcaatgctacgaagtggtttcgcagaggatgatatttatactacggta
gagctcacttttgaaatggaaggcaggatttatcatgttttacgtcagcctggccatatc
aaagcaaaaaataaaagtattacaggtaagaaaattgaattggctgaagttaaagaaggt
aaacttgattttggtattgtagaaaagcaacaaacacttgaggtagataaaaagctacaa
gaaataataggtctgacaaaggaccaatttagccaaattgtcatgctaccacaaggtgag
tttcgcaagctattaacctctgattctacaaacaaagaggttatattacgtaaaatattt
aaaacagatcgcttcggtgcaatgaccaaaaaactagatgccaaacgaaaagaagcagag
agtgatttactacgagctcaacaattaaagaagcatttacttggtcaaattgcaggagcc
ttaccacagcgaccttcttttttatttacttgtataaatgataataccgcaaacatgcat
caagtgaaaaaggcactggaagaggaacatgcctattatattgaatgtattcaagtagag
caacagcgctatgaggaagcctatgctcatcatcaaaaagaacaagaatattacagtatg
gcaaaaacgctgaatgaacaatttgaagagcaatccaaacgtcaaagccaactgcaagca
ttgctacaagaacaggatgtatatactgttaaggaacgtgagattgctttggcagagaaa
gcagaacggctagtgttagttgagcaacaatgtatcgatctacgcaatgagctaaataga
aaagaacaatcctatcagcaagcgttgatggaacagcaaaatgcagaggctcagctgata
gttgcacaagaaaagtttaacgctgaagaggcaaaagagcctgaacgacagcgcatacta
cagcaagaaatacagctccaagcattattaccgaaatttgaagcgtatgagcataatctt
cagcaaatgcaactagctgagcaatatgtcgttacagccaaacggtcactagcagataat
gttgcattgctcgaaaaagaacaactgcaattacagcaattaacaacaacaattgagcaa
tatgaaaaacagctagaaccatatgaaagttatttagaacaactgcccaagctaaaggaa
caagtatcattactagcgcaagttgaaaagtatacaaaggcagttgagacaattgagcag
gatgtaatgactgctaatgtcggtaacctagaaagtaaacaagcccttcaaaagctagaa
cagcaatggattactagccaagcaagtatcttagctcggcagcttaaagatggggagcct
tgcccagtttgcggtagtacaacacacctcaaaacacatttagaacaattggagaatatt
gaattagcccaggtggaagctttacgggtaaaggcaacaactaatgaacgtaagtttttg
gagaaagaagctttattgaattccaccaagcagcttttacaagaggcactagcgcagctg
gagacgaatcatatcgatcaaaccaatcaagcacaaatagtagcctccttacaatttgta
gagcaacaaattacctttttaaaaatagtgaatcagcaattagttgatgtacgcatgaaa
caaaggcaacaacgtggaagtctggagttgctacaagaaaagcacataaagctagagcga
tatttagctgaccagacgcaggaattaacaaagcaacgggcaattgtggaggaacagcaa
aagcatatccctgaaaatagtaagacgttacagtcattaaagcaggcaattgcggatatc
gcttcacagaaggttgtattacaaactgcttggcataccagccaacaaagcctacaaact
tcaaaggaagcagtaaacggtgctaaaaaggctgttgaaataaccaaacaggctgtcgag
gaattaaagctgaaaatggatgaaaggcgcgagcaattttcagaaagtatgagaatcgca
ggctttagaaattttgaagaatttactgccgcgaagcgcaatgagtatcaattagaggct
ttacggaaggcttgtagtgattatacgctacaaatacacacattgcaggtacaaattact
gaaggagctaaacatcttcaaggaaaggagaagcaagatttagcgttaatggaagaaaag
cttgagaagtaccgtgtaacatatgaggatgcatttaaagtgttacagcaaatgaaagga
tttgcaaaagcatgtgaagactttattgaaagaatcgaagaaacagcacaagagattcgt
ttacttgaaaaagaagcaggacgagtgaaagagctctatgccatgttaaatggtcagaat
acgaaaaagttatcctttgagcgttatatccaaatcaactatttagataaaatcacagag
gcagcaaatgtacgtttacagcatttatcgaatggacaatttgagcttcgacgttctgat
cgattagaaaagcatgctaagcaaagtggtttagggttagatgtttatgatgcctataca
gatcaattacgcgatgtgaaaacattatcgggtggagaaaagtttaatgcatcattaagt
cttgcccttggtatggcagatgtcattcaaagctttcaggggaatattcatattgaaaca
atgtttatcgatgagggcttcggatcacttgatgaagaagctttaaataaggcgattgat
acactgattgatttacaggattctggacgtatgattggcgttatttctcacgttgcagag
ttaaaagctacaatgccagctgtgttacatgttgaaaaaacaatgaatggtcatagtcaa
acttattttgaagtgaagtag

DBGET integrated database retrieval system