Lysinibacillus pakistanensis: GDS87_20935
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Entry
GDS87_20935 CDS
T06280
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
lpak
Lysinibacillus pakistanensis
Brite
KEGG Orthology (KO) [BR:
lpak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpak03400
]
GDS87_20935
DNA repair and recombination proteins [BR:
lpak03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GDS87_20935
Archaeal homologous recombinant proteins
GDS87_20935
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
GTP_EFTU
nSTAND_NTPase5
DUF5799
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QGG53202
UniProt:
A0ABX6DER5
LinkDB
All DBs
Position
complement(4348961..4352041)
Genome browser
AA seq
1026 aa
AA seq
DB search
MKPLKLTITAFGPYKNTEIIDFQQLGDHRLFAISGKTGAGKTTIFDAICYALYGSGSGED
RQDTAMLRSGFAEDDIYTTVELTFEMEGRIYHVLRQPGHIKAKNKSITGKKIELAEVKEG
KLDFGIVEKQQTLEVDKKLQEIIGLTKDQFSQIVMLPQGEFRKLLTSDSTNKEVILRKIF
KTDRFGAMTKKLDAKRKEAESDLLRAQQLKKHLLGQIAGALPQRPSFLFTCINDNTANMH
QVKKALEEEHAYYIECIQVEQQRYEEAYAHHQKEQEYYSMAKTLNEQFEEQSKRQSQLQA
LLQEQDVYTVKEREIALAEKAERLVLVEQQCIDLRNELNRKEQSYQQALMEQQNAEAQLI
VAQEKFNAEEAKEPERQRILQQEIQLQALLPKFEAYEHNLQQMQLAEQYVVTAKRSLADN
VALLEKEQLQLQQLTTTIEQYEKQLEPYESYLEQLPKLKEQVSLLAQVEKYTKAVETIEQ
DVMTANVGNLESKQALQKLEQQWITSQASILARQLKDGEPCPVCGSTTHLKTHLEQLENI
ELAQVEALRVKATTNERKFLEKEALLNSTKQLLQEALAQLETNHIDQTNQAQIVASLQFV
EQQITFLKIVNQQLVDVRMKQRQQRGSLELLQEKHIKLERYLADQTQELTKQRAIVEEQQ
KHIPENSKTLQSLKQAIADIASQKVVLQTAWHTSQQSLQTSKEAVNGAKKAVEITKQAVE
ELKLKMDERREQFSESMRIAGFRNFEEFTAAKRNEYQLEALRKACSDYTLQIHTLQVQIT
EGAKHLQGKEKQDLALMEEKLEKYRVTYEDAFKVLQQMKGFAKACEDFIERIEETAQEIR
LLEKEAGRVKELYAMLNGQNTKKLSFERYIQINYLDKITEAANVRLQHLSNGQFELRRSD
RLEKHAKQSGLGLDVYDAYTDQLRDVKTLSGGEKFNASLSLALGMADVIQSFQGNIHIET
MFIDEGFGSLDEEALNKAIDTLIDLQDSGRMIGVISHVAELKATMPAVLHVEKTMNGHSQ
TYFEVK
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgaagccattgaagttaacaattactgcattcggtccatataaaaacacggaaataatt
gattttcaacagcttggtgaccatcgtttatttgcgatttctggtaaaacaggggctggt
aaaacgactattttcgatgctatttgttatgcgctatatggatcaggtagcggtgaggat
cgtcaggatacagcaatgctacgaagtggtttcgcagaggatgatatttatactacggta
gagctcacttttgaaatggaaggcaggatttatcatgttttacgtcagcctggccatatc
aaagcaaaaaataaaagtattacaggtaagaaaattgaattggctgaagttaaagaaggt
aaacttgattttggtattgtagaaaagcaacaaacacttgaggtagataaaaagctacaa
gaaataataggtctgacaaaggaccaatttagccaaattgtcatgctaccacaaggtgag
tttcgcaagctattaacctctgattctacaaacaaagaggttatattacgtaaaatattt
aaaacagatcgcttcggtgcaatgaccaaaaaactagatgccaaacgaaaagaagcagag
agtgatttactacgagctcaacaattaaagaagcatttacttggtcaaattgcaggagcc
ttaccacagcgaccttcttttttatttacttgtataaatgataataccgcaaacatgcat
caagtgaaaaaggcactggaagaggaacatgcctattatattgaatgtattcaagtagag
caacagcgctatgaggaagcctatgctcatcatcaaaaagaacaagaatattacagtatg
gcaaaaacgctgaatgaacaatttgaagagcaatccaaacgtcaaagccaactgcaagca
ttgctacaagaacaggatgtatatactgttaaggaacgtgagattgctttggcagagaaa
gcagaacggctagtgttagttgagcaacaatgtatcgatctacgcaatgagctaaataga
aaagaacaatcctatcagcaagcgttgatggaacagcaaaatgcagaggctcagctgata
gttgcacaagaaaagtttaacgctgaagaggcaaaagagcctgaacgacagcgcatacta
cagcaagaaatacagctccaagcattattaccgaaatttgaagcgtatgagcataatctt
cagcaaatgcaactagctgagcaatatgtcgttacagccaaacggtcactagcagataat
gttgcattgctcgaaaaagaacaactgcaattacagcaattaacaacaacaattgagcaa
tatgaaaaacagctagaaccatatgaaagttatttagaacaactgcccaagctaaaggaa
caagtatcattactagcgcaagttgaaaagtatacaaaggcagttgagacaattgagcag
gatgtaatgactgctaatgtcggtaacctagaaagtaaacaagcccttcaaaagctagaa
cagcaatggattactagccaagcaagtatcttagctcggcagcttaaagatggggagcct
tgcccagtttgcggtagtacaacacacctcaaaacacatttagaacaattggagaatatt
gaattagcccaggtggaagctttacgggtaaaggcaacaactaatgaacgtaagtttttg
gagaaagaagctttattgaattccaccaagcagcttttacaagaggcactagcgcagctg
gagacgaatcatatcgatcaaaccaatcaagcacaaatagtagcctccttacaatttgta
gagcaacaaattacctttttaaaaatagtgaatcagcaattagttgatgtacgcatgaaa
caaaggcaacaacgtggaagtctggagttgctacaagaaaagcacataaagctagagcga
tatttagctgaccagacgcaggaattaacaaagcaacgggcaattgtggaggaacagcaa
aagcatatccctgaaaatagtaagacgttacagtcattaaagcaggcaattgcggatatc
gcttcacagaaggttgtattacaaactgcttggcataccagccaacaaagcctacaaact
tcaaaggaagcagtaaacggtgctaaaaaggctgttgaaataaccaaacaggctgtcgag
gaattaaagctgaaaatggatgaaaggcgcgagcaattttcagaaagtatgagaatcgca
ggctttagaaattttgaagaatttactgccgcgaagcgcaatgagtatcaattagaggct
ttacggaaggcttgtagtgattatacgctacaaatacacacattgcaggtacaaattact
gaaggagctaaacatcttcaaggaaaggagaagcaagatttagcgttaatggaagaaaag
cttgagaagtaccgtgtaacatatgaggatgcatttaaagtgttacagcaaatgaaagga
tttgcaaaagcatgtgaagactttattgaaagaatcgaagaaacagcacaagagattcgt
ttacttgaaaaagaagcaggacgagtgaaagagctctatgccatgttaaatggtcagaat
acgaaaaagttatcctttgagcgttatatccaaatcaactatttagataaaatcacagag
gcagcaaatgtacgtttacagcatttatcgaatggacaatttgagcttcgacgttctgat
cgattagaaaagcatgctaagcaaagtggtttagggttagatgtttatgatgcctataca
gatcaattacgcgatgtgaaaacattatcgggtggagaaaagtttaatgcatcattaagt
cttgcccttggtatggcagatgtcattcaaagctttcaggggaatattcatattgaaaca
atgtttatcgatgagggcttcggatcacttgatgaagaagctttaaataaggcgattgat
acactgattgatttacaggattctggacgtatgattggcgttatttctcacgttgcagag
ttaaaagctacaatgccagctgtgttacatgttgaaaaaacaatgaatggtcatagtcaa
acttattttgaagtgaagtag
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