Lysinibacillus pakistanensis: GDS87_22780
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Entry
GDS87_22780 CDS
T06280
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K21701
AraC family transcriptional regulator, transcriptional activator for feuABC-ybbA operon
Organism
lpak
Lysinibacillus pakistanensis
Brite
KEGG Orthology (KO) [BR:
lpak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lpak03000
]
GDS87_22780
Transcription factors [BR:
lpak03000
]
Prokaryotic type
Helix-turn-helix
AraC family
GDS87_22780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
Peripla_BP_2
AraC_binding
Cupin_2
MannoseP_isomer
HU-CCDC81_bac_1
Neugrin
Motif
Other DBs
NCBI-ProteinID:
QGG53523
LinkDB
All DBs
Position
4735101..4736675
Genome browser
AA seq
524 aa
AA seq
DB search
MSGLSQIFHLQEVSYSIPSAMWQLYHCDHHSLVVVISGHGELICHHETIHLTEEKCVLIP
PNQKVNVHNESGVLCFYHLTFKIIQLQESQTDCFSIFTQFQELGCHPFSQCTNLLEIIYR
HRLAMDELSLFEQHVRFQEFMLFIMNQNVPNQQQKSVRQSVEQSIKYLQKHYERDWTVEQ
LAELAAVPRWNYSRIFKDITGQIPLNFLNNVRLEKAKQLLVTTNDRIFEISQTVGFNNEY
YFNRRFKEHVGISPGQYRRGQSNNPRIFAPFLEDFLVALGITPIAQFSHSKWGKQDYLGL
QEIPDIDIEKGQMDQLFHYKPTLIMLDEGIERWKACHQLDQLAPTYHLSHPGEDWRTTLF
QIADLTGRMAIMKDVINQYEVKVQKAKKVLQKSVYGQSVAFLRISAIGISLYAGPACGYT
GPILYRDLGLMPHESVWNIPHYTRKTHLTIDQLIHLDADHLFITFDKQHSIFEGEERVIL
KSPTWSNLPAAKNNCVYEVDFLTWMNYGILSHNKKIDDVLRVLG
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtttatcgcaaatatttcacttacaagaagtttcatattctattccgtcagca
atgtggcaactatatcattgtgaccatcatagccttgttgtagttataagcggccatgga
gagctaatttgtcatcatgaaactatccatcttactgaagaaaagtgtgtgctcattcct
cctaatcaaaaagtaaatgttcacaatgaaagtggggtgctgtgcttttatcacttaaca
tttaaaatcatccaactgcaagaaagtcagacggattgcttttctatttttacacaattt
caagaactaggctgccatcctttttctcaatgtactaatttgttagaaatcatttatcga
caccgtctagcaatggatgagctatcgctatttgagcaacatgtacgcttccaagaattt
atgttattcattatgaatcaaaatgtacctaatcagcagcagaaaagtgttcgtcagtcc
gttgagcaatccatcaaatatttacaaaagcattatgaacgggattggactgttgagcaa
ttggcagaattagcggctgtcccacgctggaattattctcgtatattcaaggacattact
ggtcaaatcccactcaattttttaaacaatgttcgtcttgaaaaagccaagcaattacta
gtaacaacgaatgaccgtatttttgagatcagtcaaacggttggattcaacaatgaatat
tattttaatcgccgctttaaagagcatgtcggtatctctcctggacaatatcgtcgtggc
caaagtaataaccctcgtatattcgcaccatttttagaggattttttagtggcattaggt
attacacccatcgcccaatttagccattcaaaatggggcaaacaggattatctagggtta
caagaaatacctgatattgatattgaaaaaggacaaatggatcagctttttcattataaa
ccaactttaattatgctagatgaagggatagagcgctggaaagcttgtcatcaattagat
caattggctcccacttatcatctctcacatccaggtgaagattggcgaactacattgttc
caaatagctgacttaacaggtagaatggctattatgaaggatgtcattaaccagtatgag
gtaaaagtgcaaaaggcaaaaaaagtgcttcaaaaatcagtatatggacaaagtgtagcc
tttcttcgtatctccgctattggcatcagcctctatgcaggacccgcatgcggctatacg
ggtcccattctatatcgtgatctcggcttaatgccccatgaatctgtatggaatatccca
cattatacacgaaaaacacatctaacaattgaccagcttattcacttagatgccgatcat
ttattcattacctttgacaaacaacactcgattttcgagggagaggaacgagtaatacta
aaatctcctacctggagcaaccttcccgcagcaaaaaacaactgtgtctacgaggttgat
ttcttaacatggatgaactacggcattctctcccataacaaaaaaatagatgatgtttta
cgtgttcttggataa
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