Lysinibacillus pakistanensis: GDS87_23360
Help
Entry
GDS87_23360 CDS
T06280
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
lpak
Lysinibacillus pakistanensis
Pathway
lpak03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lpak00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GDS87_23360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lpak03021
]
GDS87_23360
03400 DNA repair and recombination proteins [BR:
lpak03400
]
GDS87_23360
Enzymes [BR:
lpak01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GDS87_23360
Transcription machinery [BR:
lpak03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GDS87_23360
DNA repair and recombination proteins [BR:
lpak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GDS87_23360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Dockerin_1
HHH_5
SpoIVA_ATPase
PASTA
DUF961
Motif
Other DBs
NCBI-ProteinID:
QGG53615
LinkDB
All DBs
Position
complement(4851468..4852412)
Genome browser
AA seq
314 aa
AA seq
DB search
MIEIEKPKIETVEISEDSKYGKFVVEPLERGYGNTLGNSLRRILLSSLPGAAVTSIQIDG
VLHEFSTVEGVVEDVASIILNVKKLALKIYSDEEKVIEIDVKGDGTVTAADITHDSDVEI
LNPDLYIATIAKNGHLRMRMYAQRGRGYTPADQNKREDLPIGVIPIDSIYTPVSRVNFQV
ENTRVGQSSDYDKLSLDVWTDGSIGPKEAISLGAKILTEHLNIFVGMTDEAQTAEIMVEK
EEDQKEKVLEMTIEELDLSVRSYNCLKRAGINTVLELANKSEDDMMKVRNLGRKSLEEVK
AKLEELGLGLRKED
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaattgaaaaaccaaagattgaaacggtggagatcagcgaagattccaaatat
ggaaagtttgttgtagaaccgcttgaacgcggatatggaaacactttgggtaattcttta
cgtcgtatccttctgtcttcattaccaggagctgctgtcacttcaattcaaattgacggt
gttcttcacgaattctcaacagtagaaggcgtggtagaggatgtagcttcaattattttg
aacgtgaaaaaacttgctcttaaaatctactctgacgaagaaaaagttattgagattgat
gtaaaaggcgatggtacagttacggctgctgacattacacatgacagtgacgtagaaatt
ttaaacccagatctatatattgcaacaatcgctaaaaacggtcatttacgtatgcgtatg
tacgctcaacgcggccgtggttacactcctgctgatcaaaacaaacgtgaggatcttcct
atcggcgtgatcccgatcgactctatttacactccagtatcacgcgtcaatttccaagtg
gaaaatactcgtgtaggtcagtcttctgactacgataaactttctcttgatgtgtggaca
gatggtagcatcggtccgaaagaggcgatttcgctcggagcaaaaattttaaccgagcat
cttaacatcttcgttggcatgactgatgaggcacaaactgctgaaatcatggtcgaaaaa
gaagaggatcaaaaagaaaaagttttagagatgactatcgaagaacttgatctttctgtt
cgttcttataactgcttgaaacgcgctggtattaatacagtacttgagcttgcaaacaag
tcagaagacgatatgatgaaggttcgtaaccttggacgtaagtcactagaagaagtaaaa
gcgaagttagaagagcttggtttaggattacgcaaagaagactaa
DBGET
integrated database retrieval system
