Leeuwenhoekiella palythoae: LDL79_01670
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Entry
LDL79_01670 CDS
T07563
Name
(GenBank) DNA mismatch repair protein MutS
KO
K07456
DNA mismatch repair protein MutS2
Organism
lpal
Leeuwenhoekiella palythoae
Pathway
lpal03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lpal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LDL79_01670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpal03400
]
LDL79_01670
DNA repair and recombination proteins [BR:
lpal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
LDL79_01670
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
COG3_N
MSSS
Motif
Other DBs
NCBI-ProteinID:
UBZ10840
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All DBs
Position
392522..394699
Genome browser
AA seq
725 aa
AA seq
DB search
MIKIHPKTLSDLEFHTVCAQLSALCITDMGKVKALKLAPQRNYRKTLFVLDQTQEYINAD
THETPIPNHGFDALDHELKMLGIEDTVLEVGSFRKIGSLSETVNTHLRYFRKFQETFPVL
HQTVRDTEYTTALTDEINTIVDRYGEIKDDASPVLLQTRRAINEVKGKINSSFASALSRY
ASYGYLDEIRESIVDNVRVLAVSAMHRRKVKGSILGNSKTGSIVYIQPEATQSHQRELNN
LLYDEQEEVKRILKALTDFVRPFSPLLTEYQKLLSTIDVIAAKAKYAKKLDAVLPKITKD
RELEIKEAYHPLLLLNNRKRGEKTYPQDIKLDADNRIIVISGPNAGGKSITLKTVGLLQV
MLQSGLLIPVHEYSRFCLFDKILTDIGDNQSIENHLSTYSYRLKNMNYFLRKCDDKTLFL
IDEFGTGSDPELGGALAETFLEVFYERNSYGIITTHYANLKMMANETEAITNANMLFDSR
TLEPLYKLYVGEAGSSFTFEVAQKNGIPYSLINRSKKKVERGKIRFDKSIANLQKERSKL
AKTTTSLKTKEQEAAKQQQELNKTNARIQEKLESYQELYDSNQRLIYLGQKLDDLSEKFF
SNKNKKLLLDELYKVVQIENSKRQRQSAKQKRAQKAKERRIQQEAEKKVQVIRQKKKEEK
QKEIQVEKAKPKVSLQVGDQVRLPDGRAVGSIDKIEKGKATVDYGMFTTQVDVDTLEFVK
RPKAK
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgataaagattcatcctaaaaccctttcagatttagaattccacacggtttgtgcgcaa
ttgagtgcgctttgcatcaccgatatgggcaaagtaaaggccttaaaactggcacctcag
cgcaattatagaaagacattatttgttcttgatcaaacccaagaatacattaacgcggat
acgcacgaaacgcctattcctaatcacggttttgatgcgcttgatcatgaactcaagatg
ctggggatagaagatacggtacttgaggtgggtagttttagaaaaataggtagcctttca
gaaacggtaaatacacacttaagatactttagaaaatttcaggaaacatttccggtactg
catcaaaccgttcgcgatactgaatataccactgccttgaccgatgagatcaacaccatc
gttgatcgctatggcgaaattaaagatgatgcctcaccggtactcttacaaaccagaaga
gccatcaatgaggtaaagggtaaaatcaacagcagctttgcttcggcgctatcgcgctac
gcctcttatggttatttagatgaaatacgcgaatctatcgtagataacgtacgtgttctg
gcagtttcggcaatgcacagacgcaaggtaaaaggttcgattcttgggaattcaaaaacc
ggaagcattgtttacattcagccggaagcaacccagtcgcatcagcgcgaactcaacaat
ctgctgtatgatgagcaagaagaggttaaacgcattttaaaagcactcaccgattttgtt
cgaccttttagtccgttattaacagagtatcaaaagctgctgagtacaatagacgtcatt
gcagcaaaagcaaagtacgccaagaagcttgacgcggtgctgccaaaaatcactaaagat
cgcgaactagagattaaagaggcctatcacccactcttgcttttaaacaacagaaaacgc
ggggagaaaacctatccgcaggacatcaaactggatgcagacaatcgtatcattgtcatc
agcggccccaatgccggcggaaagagtattactctaaaaaccgtgggcttgcttcaagtg
atgctgcaaagcggactcttgattcctgtacacgaatactctcgtttttgcctttttgat
aaaattcttacggatattggtgacaatcaaagtatagagaatcacttgagtacctatagc
taccgtctgaagaatatgaactattttctgcggaaatgtgacgacaagaccttatttctc
attgatgaatttggtaccggtagtgatcctgaattgggtggtgctttagccgaaaccttt
ctcgaagtattttatgagcgcaacagctatggaattatcacaacccattatgccaattta
aaaatgatggcaaatgagaccgaagcgatcaccaatgccaatatgctttttgactcgcgc
acgcttgagccgctttacaaattatatgtaggtgaagccggaagctcgtttacttttgaa
gtggcacagaaaaatgggattccctattcgcttatcaaccgctctaaaaagaaagtagaa
cgaggtaaaatacgttttgataaaagtatagccaacttgcaaaaagaacgcagcaagcta
gccaaaaccactacttctttaaaaactaaagagcaggaagcggcaaaacagcagcaagag
ttaaataaaaccaatgcacgcattcaggagaagttagaaagctatcaagagctttacgac
agtaaccagcgtttgatttatctggggcaaaaactagatgacctgagcgagaagtttttc
agtaataagaataaaaaattgcttctagacgaactctacaaagtggttcagattgaaaat
tcaaaacggcaaaggcagagtgcaaaacaaaaacgcgctcagaaggctaaggagcgtcgc
attcagcaagaagcagaaaagaaggttcaagtaatccgtcaaaagaagaaagaggaaaaa
cagaaagaaattcaggttgaaaaagcaaaacctaaagtaagcttgcaagttggcgatcaa
gtacgcctgccagacggtagagccgtaggcagtatcgacaaaattgaaaaaggcaaagca
accgtagattatggtatgtttaccacccaagtggacgttgacacgcttgaatttgttaaa
agacctaaagctaaataa
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