KEGG   Leeuwenhoekiella palythoae: LDL79_05595
Entry
LDL79_05595       CDS       T07563                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
lpal  Leeuwenhoekiella palythoae
Pathway
lpal03030  DNA replication
lpal03410  Base excision repair
lpal03420  Nucleotide excision repair
lpal03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lpal00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LDL79_05595 (polA)
   03410 Base excision repair
    LDL79_05595 (polA)
   03420 Nucleotide excision repair
    LDL79_05595 (polA)
   03440 Homologous recombination
    LDL79_05595 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lpal03032]
    LDL79_05595 (polA)
   03400 DNA repair and recombination proteins [BR:lpal03400]
    LDL79_05595 (polA)
Enzymes [BR:lpal01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     LDL79_05595 (polA)
DNA replication proteins [BR:lpal03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     LDL79_05595 (polA)
DNA repair and recombination proteins [BR:lpal03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     LDL79_05595 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     LDL79_05595 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1 Pro-kuma_activ RNase_H_2
Other DBs
NCBI-ProteinID: UBZ11589
LinkDB
Position
complement(1321213..1324059)
AA seq 948 aa
MAVQKRLFLLDAYALIFRGYYALIKNPRVNSKGQDTSAIMGFVNSLFDVIKREKPDHLAV
AFDKGGSSERVEMYEEYKANRDETPEAIRIAVPIIQEILKAMHVPCIEIEGVEADDLIGT
LAKQAEKEDYQVFMVTPDKDYAQLVSENIFMYKPARMGNGIEIWGIPEVQKRFEVERPEQ
VIDYLGMMGDASDNIPGLPGVGDKTAKKFIKQYGGLEGLLENTDQLKGKMKEKVIENAEL
GRLSRKLATIMTDCDVKFDAEQYELSQPDADKVQEIFDELEFRRLKDQFIKIFSGEADSD
TGAAVSGTETAKKLVSSAEKAANAGAGQYNLFGGDEPAIEECNSRKTIKDTEHFYQSVAP
GMAMNLFIKNLMKQTSVCFDTETTDLDPLQAELVGIAFSWEKTKGFYIPFPSEKEEAQKL
IEALRPFFEAEEIEKIGQNLKYDIKVLAKYDVEVKGKLFDTMIAHYLINPDMRHNMDVLA
ETYLNYTPVSIEELIGKKGKNQKSMADVPVDQQTEYAVEDADVTLQLKEHFQKELGEANT
QKLFDDIEIPLVQVLADMELEGINLDQEFLGSLSEALNNDITSLEKSIYEEAGEEFNIGS
PKQLGEILFDKLKLVDKPKKTRTGQYSTAEDVLSYLAPDHEIVQHVLDYRGLSKLKSTYV
DALPAQVNAKTGRVHTDYMQTVAATGRLSSNNPNLQNIPIRTERGRQVRKAFVPRNEDYV
LLAADYSQIELRIIAALSQEETMMKAFQEGEDIHASTAAKVFNVPIDEVTREQRSNAKTV
NFGIIYGVSAFGLSNQTDLSRTESKELIDTYYKTYPKLRNYMSEQVDFARENGYVSTVLG
RRRYLKDINSSNAVVRGAAERNAVNAPIQGSAADIIKIAMIKIHQKLKDKGLKTKMLLQV
HDELVFDVYKSELDEVQELIKSEMENAFKLDVPLDVEVGLGDNWLDAH
NT seq 2847 nt   +upstreamnt  +downstreamnt
atggctgttcaaaagcgcttatttcttttagatgcttatgcattgatttttcgtggttat
tacgcactgattaaaaatccgcgagtgaactcaaaagggcaggatacttctgcaattatg
ggttttgtcaactcgctttttgatgtgatcaagcgtgaaaagccagatcatctcgcagtg
gcatttgataaaggcggaagttcggaacgtgttgaaatgtatgaagagtacaaagcgaat
cgtgatgaaactccagaagcgattcgtattgcggtgcctattattcaggagattcttaaa
gcgatgcacgtgccgtgtattgagatcgaaggcgtggaggcagatgatttgatcggtacg
ctggccaagcaggcagaaaaagaggattatcaggtttttatggtgacgccagacaaggat
tatgcacagctggtttcagaaaacatctttatgtacaaaccggcacgaatggggaatggg
atcgagatctggggaatccctgaagtgcaaaaacgttttgaagtcgagcgtccggaacag
gtgatcgattatttgggaatgatgggtgacgcgtctgataatattccgggattgccggga
gtgggagataaaacggctaagaagtttatcaagcagtacggcggactagaaggtctgtta
gaaaatacagatcagcttaaaggaaagatgaaagagaaggtgatcgaaaacgccgagctg
ggacgtctatccagaaagttagcaaccattatgaccgactgcgatgtgaaatttgatgca
gaacaatacgaactttcgcaaccggacgctgacaaagtgcaggagatttttgacgaactc
gaatttcgtaggcttaaagatcagtttattaaaatcttttcgggtgaagccgatagtgat
accggtgcagcagtaagcggtacggaaacggctaaaaaactggtaagttctgcggaaaaa
gcagcgaatgccggcgcgggacaatacaatctttttggtggtgatgagcctgctattgaa
gagtgcaattctcgaaaaaccataaaggacacggagcatttttaccaaagtgtagccccc
ggaatggcgatgaacttgttcatcaaaaacttaatgaagcaaacttcggtatgtttcgat
accgaaactactgatctagatccgttgcaggcagaactggtagggatcgctttcagctgg
gagaaaaccaaaggattttatattccatttccgtcagaaaaagaagaagcacaaaaatta
atcgaagcactgcgtccgttttttgaagcggaagaaatcgagaaaattgggcaaaacctt
aagtatgacattaaggtgttggcgaagtatgatgtcgaagtaaaaggaaagctttttgat
acgatgatcgcgcattatctgatcaatccagatatgcgtcacaatatggacgtgcttgca
gaaacttaccttaactatacgccggtttctattgaagaattgatcggtaaaaaaggcaag
aatcagaaatcaatggccgacgtccctgttgatcagcaaaccgaatatgctgtagaagat
gcagatgtaacgcttcagctgaaagagcattttcaaaaagaattgggcgaggccaatacg
caaaagttgtttgatgatatcgaaattcctttagtgcaggttttagctgatatggaatta
gaaggaatcaacctggatcaggaatttttaggcagtctttctgaagcgcttaataatgac
atcacctcgctggagaaaagtatttatgaagaagcgggagaagaatttaatattggttcg
ccaaagcaattgggtgaaatactatttgacaaattaaagcttgtagataaaccgaagaaa
acccgtacagggcaatattctaccgcagaagatgtgctttcttatttagctcctgatcac
gagatcgtgcagcacgtgcttgattatcgaggcttgtctaaattaaaaagtacgtatgtg
gatgccttgcctgcacaggtgaatgcaaaaaccggccgcgtgcataccgattatatgcag
accgtagcagcaaccggccgactgagttcaaacaatccgaacttgcagaatattcctatc
cgtactgagcgtgggcgtcaggtgcgtaaggcttttgtgccacgcaatgaagattatgta
ttgctggcggcagattactcgcaaattgaattgcgcataattgcagctttgagccaggaa
gaaacgatgatgaaagcctttcaggagggagaagatattcacgcatctactgctgcaaaa
gtctttaatgtgcccattgatgaggtgacgcgggaacaacgtagtaatgcaaaaactgtg
aattttgggattatttacggcgtgtctgcttttggactgagcaatcaaaccgaccttagt
agaactgaaagtaaagagcttatagatacctattataaaacctatcctaaacttcgcaat
tatatgagcgaacaggtagactttgcgcgtgagaatggctacgtgtctacagttttaggt
cgtcgtcgctatttaaaggatatcaacagtagtaacgcggtggtgcgtggtgcagctgag
cgtaacgcggtaaatgcaccaatacaagggagtgctgcagatatcattaaaatcgcaatg
atcaaaatacatcagaaactcaaggataaaggcttaaaaaccaaaatgttacttcaagtt
catgatgaattggtatttgatgtttacaaatcagaattagatgaagttcaggaacttata
aaatctgaaatggaaaacgcctttaaattagatgttcctcttgatgttgaagtcgggtta
ggtgataactggctagatgcccattaa

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