KEGG   Leeuwenhoekiella palythoae: LDL79_05685
Entry
LDL79_05685       CDS       T07563                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
lpal  Leeuwenhoekiella palythoae
Pathway
lpal03030  DNA replication
lpal03430  Mismatch repair
lpal03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lpal00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LDL79_05685
   03430 Mismatch repair
    LDL79_05685
   03440 Homologous recombination
    LDL79_05685
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lpal03032]
    LDL79_05685
   03400 DNA repair and recombination proteins [BR:lpal03400]
    LDL79_05685
Enzymes [BR:lpal01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     LDL79_05685
DNA replication proteins [BR:lpal03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     LDL79_05685
DNA repair and recombination proteins [BR:lpal03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     LDL79_05685
SSDB
Motif
Pfam: RNase_T Rv2179c-like DEDDh_C RNase_H_2
Other DBs
NCBI-ProteinID: UBZ11606
LinkDB
Position
1350358..1351023
AA seq 221 aa
MRIPFFSKTPEPPEFYKNYAAQFSGKSLPEFEQARFIVFDTETTGTNAREDRMLSIGALE
LKGNTISLSSSFELYVEQDVFNEEAVAIHGILRENRKYKKVTEEEAVKAFLEFIGDAILV
GHHVGFDIGIINYALKRLGAPKLKNKFTDTGVLYKRTVHLVNITDPNKVYTLDDLCEELN
ISRTDRHKAMGDAYITALAFLKILSKLKTNKKFKLKQILLN
NT seq 666 nt   +upstreamnt  +downstreamnt
atgcgcattccgtttttcagcaaaacccctgagccgcctgaattctacaaaaactacgct
gctcaattttcaggaaaaagccttccggaatttgaacaggcgcgttttattgtttttgat
acagaaaccaccggcaccaatgcccgcgaagatcgtatgcttagcattggcgccttagaa
cttaagggaaacaccattagcctttctagcagttttgaactgtatgtggaacaagacgtg
tttaatgaagaagctgttgctattcacggcattctacgcgaaaaccggaaatacaaaaaa
gtaaccgaagaagaagctgtaaaagcttttctagaatttataggtgatgccattcttgta
ggacatcacgtagggtttgacattggcatcatcaattatgcgcttaaacgccttggcgct
cctaaactgaaaaataagtttaccgataccggggtgttatacaaacgcacagtacatttg
gtaaacatcacagaccccaataaagtatatacgctagacgatttatgtgaagagctgaat
atctcccgaacagaccgacataaagcaatgggtgacgcctatatcacagcgctggccttc
ctgaagattctctctaaattgaagaccaacaaaaagtttaaactgaagcagattttactc
aattaa

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