Leeuwenhoekiella palythoae: LDL79_08135
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Entry
LDL79_08135 CDS
T07563
Name
(GenBank) integration host factor subunit beta
KO
K03530
DNA-binding protein HU-beta
Organism
lpal
Leeuwenhoekiella palythoae
Brite
KEGG Orthology (KO) [BR:
lpal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lpal03032
]
LDL79_08135
03036 Chromosome and associated proteins [BR:
lpal03036
]
LDL79_08135
03400 DNA repair and recombination proteins [BR:
lpal03400
]
LDL79_08135
DNA replication proteins [BR:
lpal03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LDL79_08135
Chromosome and associated proteins [BR:
lpal03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
LDL79_08135
DNA repair and recombination proteins [BR:
lpal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
LDL79_08135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
PqqD
Motif
Other DBs
NCBI-ProteinID:
UBZ12077
LinkDB
All DBs
Position
complement(1917618..1917914)
Genome browser
AA seq
98 aa
AA seq
DB search
MTKADIVAKISEKLGIEKNDVQATVETFMTEVKNSLEGGDNVYLRGFGSFIIKTRAEKTG
RNISKNTTIKIPAHNIPAFKPAKVFVEGVKSNVSVDEN
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaagcagatattgttgccaaaatttctgagaaactaggaatcgagaaaaacgat
gtacaagcaactgttgaaaccttcatgactgaagtaaagaattctttagaaggtggtgac
aatgtttacctaagaggttttggaagttttatcattaaaactcgtgctgagaaaaccggc
cgtaacatttctaagaatactacaatcaagataccagctcataacatccctgcatttaaa
cctgcaaaggtatttgttgaaggtgttaagtcaaacgtatctgtagacgaaaactaa
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