Leeuwenhoekiella palythoae: LDL79_08335
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Entry
LDL79_08335 CDS
T07563
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lpal
Leeuwenhoekiella palythoae
Brite
KEGG Orthology (KO) [BR:
lpal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lpal03016
]
LDL79_08335 (truB)
Enzymes [BR:
lpal01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LDL79_08335 (truB)
Transfer RNA biogenesis [BR:
lpal03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LDL79_08335 (truB)
Prokaryotic type
LDL79_08335 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
UBZ12116
LinkDB
All DBs
Position
complement(1956478..1957191)
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AA seq
237 aa
AA seq
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MQFTEEYFKEGQVLLFDKPLNWTSFQLVNKVRWLIRKTFKIKKIKVGHAGTLDPLATGLL
IICTGKFTKRIEEFMGQEKEYTGTIVLGATTPSYDLETEIDQTFSTEHLNDTFVKATTAQ
FTGAIQQQPPVFSALKKDGKRLYEFARAGEEVDIPSRTVEISEFEITRIELPEVDFRVRC
SKGTYIRSLAHDFGKALNSGGHLSALRRTKIGDFDVQDATSLESFEAALKQAETSNN
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgcagtttaccgaagaatattttaaagaaggtcaggttttactttttgacaagccgctc
aattggacctcatttcaactggtaaacaaagtgcgctggttgatccgcaaaacctttaag
atcaaaaagatcaaagtaggccacgcaggtactttagaccctttggccactggtttgctt
atcatctgcaccggtaaattcaccaagcgtattgaagaatttatggggcaagagaaagaa
tatacgggcactatcgtactaggtgctacgacgccttcttatgacctggaaacagagatt
gatcaaactttttctacagaacatttgaacgacacgtttgtcaaagccactactgcacaa
ttcaccggtgctattcagcagcaaccgccggttttttctgcattgaagaaagacggaaaa
cgcttatatgagtttgcacgcgccggtgaggaagtggatattcccagcagaaccgttgaa
atttcagaatttgaaatcacccgaatcgaacttcctgaggttgattttagggtgcgttgc
agtaagggaacgtacatcagatcattagcacacgattttggaaaagcactaaacagcggc
ggacatctttccgctttgcgaagaacaaaaattggtgattttgatgtgcaagatgctacc
tctttagaaagctttgaggccgctttaaaacaagctgaaacttcaaacaattag
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