Leeuwenhoekiella palythoae: LDL79_10740
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Entry
LDL79_10740 CDS
T07563
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
lpal
Leeuwenhoekiella palythoae
Pathway
lpal00550
Peptidoglycan biosynthesis
lpal01100
Metabolic pathways
lpal01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
lpal00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LDL79_10740 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LDL79_10740 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lpal01011
]
LDL79_10740 (mrdA)
Enzymes [BR:
lpal01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
LDL79_10740 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
lpal01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
LDL79_10740 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
UBZ09278
LinkDB
All DBs
Position
complement(2528440..2530356)
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AA seq
638 aa
AA seq
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MRKILLFSIVLISGILLTGRLFYLQILDTSYASLSVNNAIKRIYDYPQRGHIYDRNGSLL
VSNQPSYDVMVIPREVKPFDTTEFCGLLKMTKEALVKRLDKARVYSPRLPSIVIPQLTKS
EYAYLQEKMRKYEGFYIQKRSLRDYQVDYGANFLGYIAEVNRADIEDNPYYQSGDLKGRT
GVERQYEEILRGVKGVKYIQKDRFNRDIGAYKNGSLDTIPKPGKDLTLTIDAELQKYGEE
LMVNKRGGIVAIEPSTGEILALVSAPNFDPALLVGRERSRNFTNLYYDSIAKPLFDRGLQ
AQYPPGSPFKTLNALIALQEDVVDPQESFACHMGYYYGSRGRKLGCHSHPSPLSMVPGIA
NSCNAYFANVYRRVIEKYDTPQEGMDVWHNHLASFGLGQYMGTDLPTGRPGYIPDSDYYN
RAYEYPKYKWFSTATISNSIGQGEVSLTPIQLANVTATIANRGWFYTPHIVKDIEGEHDA
IPEKYRTKNYTTIDAKNYEPVVEGMSGAYNYGTAAGVQIPGIEICGKTGTAENYTKIDGK
RQQLTDHSIFVAFAPKDNPKIAIAVFVENGYWGGRYGGKIASLMIEKHIKGEITRTDLED
WILTHSLEEEYAKPLSGKPFPINDGKKISGKIEEKLKS
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaaattctgcttttttctattgttttaatttccggaatcctcctaacaggaagg
ctcttttatcttcagattttagatacttcctatgccagtttatcggtaaacaatgcgatc
aagcgaatttatgattacccgcaacgcggccacatctatgatcgcaacggttcgctatta
gtcagcaaccaaccttcgtatgatgttatggttattcctcgagaagtaaaaccctttgac
actaccgagttttgtggcttattaaaaatgacgaaagaagcattggtcaagcgattagac
aaagcccgtgtgtattctcccagacttccgtctatagtgattccgcagcttacaaaatcc
gaatacgcttatttacaggaaaaaatgcgtaagtatgaaggtttttatattcaaaaacga
tcgttgcgtgattatcaggtagattacggcgcaaattttttaggctatatcgccgaagta
aaccgtgctgatattgaagataacccgtactatcaatcaggtgacttaaaagggcgtaca
ggagttgaacgccaatacgaagaaattttacgcggagtaaaaggagttaaatacattcag
aaagatcgttttaatcgtgatattggcgcttataaaaacggaagcctcgataccattccc
aagcccggaaaagacctgacacttaccattgatgctgagctgcaaaagtatggcgaagaa
ctaatggtaaataagcgcggcggaattgtcgccattgaaccttcaacaggtgaaattctt
gccttagtaagcgcacctaattttgatcctgcactgcttgtgggtagagagcgttctcgc
aactttaccaacttatattacgattctattgcaaaaccactttttgaccgcggtttacaa
gcacaataccctccgggatctccatttaaaaccctaaatgcacttattgctttacaggaa
gatgtggtagaccctcaagaaagttttgcctgccatatgggctattattatggctccaga
ggaagaaaattaggatgtcacagccaccctagtccgttgagtatggtaccaggaatcgca
aactcgtgcaatgcctattttgccaatgtgtaccgccgcgtgatcgagaagtacgacaca
ccacaggaaggtatggacgtttggcacaatcatctggcaagttttggacttgggcaatat
atgggaaccgatttacctacgggccgtcccggttatattccggatagcgattactacaac
agagcctatgaatatcctaaatacaaatggtttagtactgctacgatctcaaattctatc
gggcagggcgaagtgagtctcacgcctattcaacttgcaaatgtgaccgccaccattgca
aatagaggttggttttatacgccgcatatagtaaaagatattgaaggcgaacacgacgct
attcctgaaaaataccgcactaagaattatacgaccatcgatgctaaaaactacgaacct
gtggttgaaggaatgtctggcgcgtataattacggtacagcggcaggcgtacagatccct
ggaattgagatttgtggaaaaacaggaactgctgaaaactataccaaaatagatggtaaa
cgtcagcagcttacagatcattcgatttttgtagcttttgctcctaaagacaatcctaaa
attgctatcgctgtttttgttgaaaatgggtattggggtggtcgctacggtggaaagatt
gccagtttaatgatcgaaaagcatataaaaggtgagattacccgtaccgatcttgaagac
tggatcttaacccacagtcttgaagaagaatacgcaaaacccttaagcggaaagccattc
ccaattaatgatggtaaaaaaataagtggtaaaatcgaagaaaagctcaaaagttaa
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