Leeuwenhoekiella palythoae: LDL79_10820
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Entry
LDL79_10820 CDS
T07563
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
lpal
Leeuwenhoekiella palythoae
Brite
KEGG Orthology (KO) [BR:
lpal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lpal03016
]
LDL79_10820 (miaB)
Enzymes [BR:
lpal01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
LDL79_10820 (miaB)
Transfer RNA biogenesis [BR:
lpal03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
LDL79_10820 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
UBZ09294
LinkDB
All DBs
Position
complement(2543286..2544731)
Genome browser
AA seq
481 aa
AA seq
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MEKIIDESKQGEALVLEPQTTNGKKLFIESYGCQMNFSDSEIVASILAKEGYNTTQHLED
ADLVLVNTCSIRDKAEQTVRKRLEKYNAVKKGNPTMKVGVLGCMAERLKSKFLEEEKIVD
LVVGPDAYKDLPNLLGEVEEGRDAINVILSKEETYGDIAPVRLQSNGVTAFVSITRGCDN
MCTFCVVPFTRGRERSRDPQSIVEEVNDLAARGFKEVTLLGQNVDSYLWYGGGLKKDFEK
ASDMAKATAVNFAGLLSLVAEAQPKMRIRFSTSNPQDMTLDVIRTMAKYPNICKYIHLPV
QSGSDRILKEMNRLHTRQEYFELIDNIREIMPDCAISQDMITGFPTETEEDHQNTLSLME
YVKYDFGFMFAYSERPGTLAARKLEDDIPLDVKKRRLAEVIALQQEHSLYNTQKQVGKTV
EVLIEKASKKSDAEWAGRNSQNTVVVFPKEHYNVGDFVNVEILDCTSTTLLGKAVGYSDN
N
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggagaagattattgacgaaagcaaacaaggtgaagcactggttctcgagccgcaaacc
accaatggtaaaaagctttttatagaaagttatggttgccagatgaactttagcgacagc
gagatcgtggcttctatattagccaaagaaggctacaataccacccagcatttagaagac
gccgatctggttttagtaaatacctgctctattagagacaaggctgaacaaacggtacgt
aagcgtcttgagaaatacaacgccgttaaaaaaggaaatccaacaatgaaagttggtgtt
ctaggctgtatggcagagcgcttaaaaagtaaatttcttgaggaagagaagatcgttgat
cttgttgtaggccctgatgcatataaagatttgcctaatcttttaggcgaagttgaagaa
ggtagagacgccatcaatgttatcctctctaaagaagaaacctatggcgacatcgcaccg
gtgcgtttgcaaagcaatggcgttaccgcttttgtgagcatcacccgaggttgcgataat
atgtgtaccttttgcgtggtgccgtttacccgtggtcgcgagcgcagtagagaccctcaa
agtattgttgaagaagtaaatgatcttgcggcaagaggcttcaaagaagtaacacttctt
gggcaaaacgtagatagttatttatggtacggtggcggtcttaaaaaagattttgaaaaa
gccagcgatatggcaaaagctacagctgtaaattttgcaggcctactcagcctagttgcc
gaagcacaacctaaaatgcgcattcgcttttccacttctaacccacaggatatgacgctt
gatgtgataagaacgatggcaaaatatcctaatatatgtaaatacatccacttacctgta
cagagtggtagtgatcgtattttaaaagaaatgaatcgcctgcatacccgtcaggaatat
tttgagcttatagacaatatcagagaaattatgccagattgtgcgatttctcaagatatg
atcaccggtttccctaccgagaccgaagaagaccatcaaaacaccttgagtttgatggaa
tatgtaaaatatgatttcgggtttatgtttgcctatagcgaacgcccgggaactttagct
gcacgtaaactggaagacgacataccattagatgtaaaaaaacgtcgcttagccgaagtg
atcgcgcttcaacaagagcactctttatataatacacaaaagcaagtaggcaaaacggtt
gaagttcttattgagaaggcctcaaaaaagagcgatgcagaatgggcaggtcgcaattca
caaaataccgtagttgtattccctaaagagcactataacgtaggcgattttgtaaatgtt
gaaatactagattgtaccagcactacgctcttaggaaaagccgttggatattcagataat
aattaa
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