Leeuwenhoekiella palythoae: LDL79_11480
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Entry
LDL79_11480 CDS
T07563
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
lpal
Leeuwenhoekiella palythoae
Pathway
lpal03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lpal00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LDL79_11480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lpal03021
]
LDL79_11480
03400 DNA repair and recombination proteins [BR:
lpal03400
]
LDL79_11480
Enzymes [BR:
lpal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LDL79_11480
Transcription machinery [BR:
lpal03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LDL79_11480
DNA repair and recombination proteins [BR:
lpal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LDL79_11480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
DUF3189
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
UBZ09420
LinkDB
All DBs
Position
2679336..2680328
Genome browser
AA seq
330 aa
AA seq
DB search
MALLNFQKPDKVIMIDSTDFEGKFEFRPLEPGYGLTVGNALRRVLLSSLEGFAITSVRVE
GVDHEFSTIAGVVEDFTEIILNLKQVRFKRQIDEIDNETVTISVSDKEQLTAGDFQKFIS
GFQILNPDLVIANMEKKVNINMEITVEKGRGYVPAEENKKQNAPVGTIFTDSIYTPIKNV
KYSIENYRVEQKTDYEKLVFEIITDGSIHPKDALTEAAKTLIHHFMLFSDERITLEADEI
AQTETYDEESLHMRQLLKTKLVDMDLSVRALNCLKAAEVETLGDLVSYNKNDLMKFRNFG
KKSLTELEELVNVKGLNFGMDLSKYKLDKD
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcattactaaatttccagaagcccgataaggtcataatgattgactctactgacttt
gaaggtaagtttgaattcagacctttagagccaggttacggtttaactgtgggtaacgcg
ctacgtagagtattgctttcttctttagaaggttttgcaattacttcagtacgtgttgaa
ggagtagatcatgagttttcaactatagcaggagttgtagaagactttacagaaatcatt
cttaatcttaaacaagtacgatttaagagacaaattgatgagattgataatgagactgta
actatttcggtttctgataaagagcagttaactgctggtgatttccagaaatttatttct
ggttttcaaattcttaatccagatttggttatcgccaatatggagaagaaagttaatatc
aatatggaaatcacggtagaaaaaggtcgtggttatgttcctgccgaagagaataagaaa
caaaatgcacctgtagggactatctttacagattcaatctatactcctattaaaaatgtg
aagtatagcattgagaactatcgtgtagagcagaaaaccgactatgaaaagttagttttt
gaaatcatcactgatggttcaattcatcctaaagatgctttaactgaagcagcaaaaact
ttgattcatcattttatgttattttctgatgagcgtatcacccttgaggctgatgaaatt
gctcagactgaaacttatgatgaagagtcgcttcacatgcgtcagttacttaagactaaa
ttggtagatatggatctttctgtacgtgccttaaactgtctaaaagctgcagaagttgag
acgttaggagacttggtttcttataacaagaatgatctgatgaaattccgtaattttggt
aaaaaatcacttacagagcttgaagagcttgtaaatgtaaaaggccttaattttggaatg
gatctttcaaaatacaaattagataaagattag
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